Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FO393422.1-201ENST00000603908 708 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC005252.1-201ENST00000604518 1063 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC019131.2-201ENST00000609071 870 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 DUXAP10-204ENST00000612052 616 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 RN7SL787P-201ENST00000613000 284 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC068787.1-201ENST00000623908 691 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC097520.1-201ENST00000624435 385 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC006210.2-201ENST00000367074 1545 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC234772.1-201ENST00000377927 937 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-207P-201ENST00000384137 107 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-481P-201ENST00000384194 107 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 CHMP1B2P-201ENST00000399581 597 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC096533.1-201ENST00000411645 353 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 XKRYP4-201ENST00000414395 483 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC006065.1-201ENST00000422539 802 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 FO393414.1-201ENST00000428697 1184 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RPL7AP61-201ENST00000443410 636 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC023512.1-201ENST00000444513 499 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 XKRYP5-201ENST00000449659 483 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 DNAJB5P1-201ENST00000454004 806 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RPS3AP53-201ENST00000454716 778 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RPL21P18-201ENST00000469899 480 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC020779.1-201ENST00000478757 796 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC098583.1-201ENST00000480875 255 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC008427.1-201ENST00000503102 655 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC108120.2-201ENST00000512973 294 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RPL10P14-201ENST00000565265 298 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RN7SL708P-201ENST00000580952 299 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 SUMO2P14-201ENST00000604488 293 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC009597.2-201ENST00000604659 592 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AP002802.2-201ENST00000605877 235 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC010245.2-201ENST00000606908 1167 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 RNA5SP440-201ENST00000612665 119 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AL512427.1-201ENST00000618593 349 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AL590396.4-201ENST00000636779 956 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 AC006927.2-201ENST00000639256 389 ntBASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TCRBV7S3A2A0A539 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.34□□□□□ -1.56
TCRBV7S3A2A0A539 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TCRBV7S3A2A0A539 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
TCRBV7S3A2A0A539 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.34□□□□□ -1.56
TCRBV7S3A2A0A539 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TCRBV7S3A2A0A539 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 RNA5SP319-201ENST00000362768 119 ntBASIC5.33□□□□□ -1.56
TCRBV7S3A2A0A539 HSPA8P15-201ENST00000401676 786 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms