Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC245060.4-201ENST00000413293 1121 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 OR2AT2P-201ENST00000413438 905 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC244453.4-201ENST00000419150 388 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL691447.1-201ENST00000419456 387 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RFESDP1-201ENST00000422350 461 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC022022.1-201ENST00000430304 178 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RPSAP39-201ENST00000467439 883 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC090686.1-201ENST00000481577 749 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 OR52A4P-203ENST00000498233 1014 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC122718.2-201ENST00000505325 591 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC109481.1-201ENST00000509173 282 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 SNORA70.17-201ENST00000516449 133 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 IGHV3-63-201ENST00000518422 341 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 NRBF2P4-201ENST00000520874 850 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 NPM1P6-201ENST00000521088 871 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC027369.2-201ENST00000528030 440 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC092121.1-201ENST00000569452 202 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 MIR3154-201ENST00000577829 84 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 BNIP3P35-201ENST00000604530 490 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL118522.2-201ENST00000616045 615 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AP003499.2-201ENST00000624100 483 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC074101.1-201ENST00000637861 241 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.73
KCNIP3Q9Y2W7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 MIR105-1-201ENST00000385222 81 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 GAPDHP49-201ENST00000421421 961 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 RPS12P5-201ENST00000423449 371 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 IPMKP1-201ENST00000425988 855 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 MAPRE1P3-201ENST00000435438 796 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC097523.2-201ENST00000435551 652 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC022431.1-201ENST00000450941 438 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AL035090.1-201ENST00000454835 332 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AL356981.1-201ENST00000454879 684 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC108161.1-201ENST00000461060 402 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 EIF2S2P4-201ENST00000461070 984 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC025458.1-201ENST00000506046 166 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AP003033.2-201ENST00000528901 805 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC134669.1-201ENST00000581275 672 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 BMS1P7-201ENST00000602440 1052 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 HMGB1P51-201ENST00000605166 638 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 SNORD91B-202ENST00000608459 222 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC132068.1-201ENST00000623805 459 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC007683.2-201ENST00000624681 714 ntBASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.27□□□□□ -1.73
KCNIP3Q9Y2W7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms