Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL590762.2-201ENST00000395798 571 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 PSAT1P4-201ENST00000466500 526 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 NPM1P41-201ENST00000512920 831 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC009951.1-201ENST00000623674 2614 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC233968.1-201ENST00000611212 1300 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC007382.1-201ENST00000624376 2618 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 RNA5SP241-201ENST00000391326 114 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AL139039.2-201ENST00000407436 479 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AL133547.1-201ENST00000448546 220 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AP003730.1-201ENST00000524605 285 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 AC006453.5-201ENST00000636451 619 ntBASIC4.86□□□□□ -1.63
CHD7Q9P2D1 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC4.86□□□□□ -1.63
CHD7Q9P2D1 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC108467.2-201ENST00000617640 1597 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 TEK-204ENST00000519097 3836 ntTSL 2 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC005618.4-201ENST00000625053 554 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RNA5SP372-201ENST00000390836 115 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RN7SKP202-201ENST00000410439 330 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC069157.1-201ENST00000421749 137 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 YY1P1-201ENST00000427625 668 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RPS7P7-201ENST00000463499 571 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 AC018816.2-201ENST00000621460 353 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.85□□□□□ -1.63
CHD7Q9P2D1 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CHD7Q9P2D1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 UG0898H09-202ENST00000623646 7040 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 HMGB3P5-201ENST00000428894 612 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 YME1L1P1-201ENST00000429435 297 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 snoU13.24-201ENST00000458998 104 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ABCC13-202ENST00000463099 3842 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC087499.8-201ENST00000578406 226 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AF131215.7-201ENST00000602443 707 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AL121772.2-201ENST00000614331 297 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 AC140479.6-201ENST00000633535 357 ntBASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.84□□□□□ -1.63
CHD7Q9P2D1 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms