Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC092724.1-201ENST00000624623 3397 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC079753.1-201ENST00000623243 3868 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 OR10R3P-201ENST00000361688 942 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 SNORA70H-201ENST00000383910 135 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 SNORA70J-201ENST00000384182 135 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 GSTA12P-201ENST00000402398 508 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL590084.1-201ENST00000407885 387 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 MYL6P5-201ENST00000412707 459 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC016027.5-201ENST00000427227 210 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 C8orf59P1-201ENST00000429930 303 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL731534.1-201ENST00000434711 269 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL445928.1-201ENST00000435545 222 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ELOCP8-201ENST00000439309 332 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ELOCP15-201ENST00000442090 332 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 RPL34P26-201ENST00000445636 354 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 MRPL35P2-201ENST00000448009 511 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL162739.1-201ENST00000450606 307 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 RN7SL72P-201ENST00000460697 269 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 RNU6-232P-201ENST00000517144 64 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 OR10G5P-201ENST00000532733 358 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 PDCL2P2-201ENST00000533651 189 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL049830.4-201ENST00000555149 351 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AP000811.1-201ENST00000603803 651 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AP002360.4-201ENST00000606980 481 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC116165.2-201ENST00000616705 206 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC079248.2-201ENST00000623779 326 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 AC003985.2-201ENST00000562268 1669 ntBASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.61□□□□□ -1.35
PDLIM7Q9NR12 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL133268.1-201ENST00000405676 1401 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 ANKRD36P1-201ENST00000344424 659 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 RNU6-304P-201ENST00000364855 107 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 Y_RNA.559-201ENST00000384686 107 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL360271.1-201ENST00000395679 510 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL645927.1-201ENST00000396783 406 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 RPL10P10-201ENST00000403509 664 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 OR6E1P-201ENST00000414424 923 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 UBE2V1P10-201ENST00000414685 269 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TNPO1P1-201ENST00000423641 1138 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 HIGD1AP12-201ENST00000427832 281 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TAF9P1-201ENST00000445421 515 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 CYCSP42-201ENST00000450823 238 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 TAF9P2-201ENST00000454958 515 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 ANKRD26P4-201ENST00000455755 950 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC104164.1-201ENST00000460282 590 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC005532.2-201ENST00000467154 373 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC104689.1-201ENST00000473356 768 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC008629.2-201ENST00000503783 483 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 RNA5SP303-201ENST00000516192 130 ntBASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.6□□□□□ -1.35
PDLIM7Q9NR12 AC244502.2-201ENST00000543361 851 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms