Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AL772161.1-201ENST00000439130 476 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 MORF4L1P4-201ENST00000450245 976 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC110775.1-201ENST00000513721 462 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 LRRC34P1-201ENST00000542742 915 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AL049838.1-201ENST00000563647 981 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC005341.1-201ENST00000571086 708 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC023421.1-201ENST00000590535 1785 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 HSPD1P7-201ENST00000447985 1686 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AL022393.1-201ENST00000625142 1677 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 OR4F13P-202ENST00000560066 2054 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MTND5P31-201ENST00000419366 1374 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 RN7SKP126-201ENST00000411143 300 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL121878.1-201ENST00000418638 859 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL392003.1-201ENST00000434394 243 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL606490.8-201ENST00000441624 319 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC092647.3-201ENST00000443044 633 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MTND2P30-201ENST00000456663 382 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MTCO2P6-201ENST00000463134 685 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC090589.1-201ENST00000473109 362 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC021146.5-201ENST00000503544 545 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC109464.1-201ENST00000511091 819 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 OR8G3P-201ENST00000533406 921 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL445435.1-201ENST00000604232 665 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL451086.1-201ENST00000605596 223 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 OR51C1P-201ENST00000608504 942 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC096586.2-201ENST00000610260 441 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MIR6748-201ENST00000610433 71 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC090527.3-201ENST00000619041 548 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC068137.4-201ENST00000638485 296 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AC119674.1-220ENST00000641502 1048 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
EBF3Q9H4W6 AL445523.1-201ENST00000451184 1362 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.55□□□□□ -1.52
EBF3Q9H4W6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 AL603750.1-201ENST00000624216 1717 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
EBF3Q9H4W6 SNORA17.1-201ENST00000362945 126 ntBASIC5.54□□□□□ -1.52
EBF3Q9H4W6 ANAPC10P1-201ENST00000395991 556 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms