Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 MIR323A-201ENST00000362199 86 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 RNA5SP27-201ENST00000363839 119 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC004386.1-201ENST00000393214 761 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL132875.1-201ENST00000403623 949 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC246680.2-201ENST00000422106 389 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 IPPKP1-201ENST00000422501 768 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC099677.3-201ENST00000427081 395 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 VTI1BP4-201ENST00000427516 527 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC096775.1-201ENST00000437724 448 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 RPS12P17-201ENST00000438591 377 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL008629.1-201ENST00000438615 184 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 EXTL2P1-201ENST00000446218 416 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL133217.1-201ENST00000450980 425 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC126121.1-201ENST00000482313 553 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 OR7E157P-201ENST00000494376 911 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC091435.1-201ENST00000505442 584 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 OR7E99P-201ENST00000505750 922 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 BTG4P1-201ENST00000510421 183 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC119751.1-201ENST00000513357 765 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 CR383658.1-201ENST00000514609 734 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 MTND4LP31-201ENST00000514859 294 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC087373.1-201ENST00000524920 491 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC090695.1-201ENST00000561269 1222 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL163952.1-202ENST00000569625 600 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL133507.1-201ENST00000605269 557 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC013468.1-201ENST00000608680 598 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 OR2BH1P-201ENST00000608850 864 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL445423.1-201ENST00000609941 536 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL159169.2-201ENST00000610061 1269 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 MIR6768-201ENST00000610734 72 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL158062.1-201ENST00000619632 745 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AC009120.7-201ENST00000623452 780 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AP001029.2-203ENST00000589795 4910 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 SPATA2P1-201ENST00000431223 2055 ntBASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.46□□□□□ -1.54
AMBRA1Q9C0C7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 DNM1P47-203ENST00000571780 12667 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 RNA5SP510-201ENST00000364697 99 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 Y_RNA.318-201ENST00000365131 97 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 RN7SKP69-201ENST00000365390 305 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 GCNT1P4-201ENST00000404096 329 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 MIR1302-8-201ENST00000408342 128 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AC016907.1-201ENST00000419483 435 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 NME1P1-201ENST00000420914 382 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AC130360.1-201ENST00000425489 1117 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 HIGD1AP12-201ENST00000427832 281 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 PNKDP1-201ENST00000435914 430 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AC093716.1-201ENST00000435923 377 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 UBE2D3P1-201ENST00000436669 444 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 CDY12P-201ENST00000440679 1015 ntBASIC5.45□□□□□ -1.54
AMBRA1Q9C0C7 CDY13P-201ENST00000445813 1015 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms