Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 USP9YP9-201ENST00000429406 715 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 KRT8P51-201ENST00000438938 274 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 ARAFP2-201ENST00000440565 559 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 TRY2P-201ENST00000448860 689 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC009220.1-201ENST00000451614 275 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 RPS29P33-201ENST00000456717 146 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC097484.1-201ENST00000471148 389 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 CYCSP20-201ENST00000473154 315 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 RPS17P5-201ENST00000498293 408 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC010476.1-201ENST00000519111 851 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 MIR4330-201ENST00000579077 105 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC245884.10-201ENST00000597355 337 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC090912.3-201ENST00000609775 533 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AC112694.2-201ENST00000623697 768 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 AL078621.3-201ENST00000623707 2042 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 PROS2P-201ENST00000474651 1951 ntBASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTFDC1Q9BY42 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 MIR141-201ENST00000384975 95 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 GAPDHP15-201ENST00000398586 975 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 VN1R51P-201ENST00000411675 945 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 UBE2V1P9-201ENST00000414760 368 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 PNRC2P1-201ENST00000423940 420 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 RIMKLBP2-201ENST00000424737 654 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 HMGB1P5-202ENST00000451497 985 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 HMGB1P26-201ENST00000452520 628 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC107398.1-201ENST00000486904 505 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC025459.1-201ENST00000504072 156 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 OR5AM1P-201ENST00000532136 1032 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 OR4A6P-201ENST00000534364 970 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AP002373.2-201ENST00000541631 1060 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC106734.1-201ENST00000568646 663 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 MIR4420-201ENST00000583944 77 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC026979.4-201ENST00000606555 645 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC245100.7-201ENST00000609678 442 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC093799.2-201ENST00000610062 578 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC087385.3-201ENST00000620477 187 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC024023.1-201ENST00000624530 922 ntBASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.56□□□□□ -1.36
RTFDC1Q9BY42 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.55□□□□□ -1.36
RTFDC1Q9BY42 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms