Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.31□□□□□ -1.4
ABCA3Q99758 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 MFSD8-242ENST00000641690 4199 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.31□□□□□ -1.4
ABCA3Q99758 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
ABCA3Q99758 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 AL359955.1-201ENST00000455242 3275 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC010401.2-201ENST00000575137 4934 ntBASIC6.31□□□□□ -1.4
ABCA3Q99758 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.31□□□□□ -1.4
ABCA3Q99758 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ABCA3Q99758 AC008033.1-201ENST00000216407 1162 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AC009237.10-201ENST00000414112 510 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AC009237.5-201ENST00000414271 501 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AC006946.1-201ENST00000429106 328 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.3□□□□□ -1.4
ABCA3Q99758 MRPL35P2-201ENST00000448009 511 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AL162591.2-201ENST00000449634 317 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 GAPDHP14-201ENST00000450472 937 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.3□□□□□ -1.4
ABCA3Q99758 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 AC092709.1-201ENST00000521355 1045 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AL358176.3-201ENST00000420757 454 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AP001324.1-201ENST00000428553 399 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 HSFY6P-201ENST00000445573 403 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AC084783.1-201ENST00000565846 910 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AP001160.4-201ENST00000596971 382 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 OR7A19P-201ENST00000608051 733 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AL162574.1-201ENST00000615702 950 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
ABCA3Q99758 AC011815.3-201ENST00000624194 473 ntBASIC6.3□□□□□ -1.4
ABCA3Q99758 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
ABCA3Q99758 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.3□□□□□ -1.4
ABCA3Q99758 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ABCA3Q99758 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ABCA3Q99758 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ABCA3Q99758 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ABCA3Q99758 RPS26P8-201ENST00000393490 348 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 AL359265.1-201ENST00000440296 795 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 RN7SKP67-201ENST00000515905 235 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 OR4A6P-201ENST00000534364 970 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ABCA3Q99758 RN7SL652P-201ENST00000577769 300 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 AC022916.3-201ENST00000592961 742 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AC018695.5-201ENST00000605872 315 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AL023881.1-201ENST00000621088 301 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ABCA3Q99758 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.29□□□□□ -1.4
ABCA3Q99758 AC107980.1-201ENST00000558671 3355 ntBASIC6.29□□□□□ -1.4
ABCA3Q99758 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
ABCA3Q99758 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ABCA3Q99758 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 RNU1-94P-201ENST00000362627 173 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 SNORA11.2-201ENST00000408318 127 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AL356095.1-201ENST00000417217 199 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 QRSL1P2-201ENST00000418582 964 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 RPS29P17-201ENST00000430795 166 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 PRPF38AP1-201ENST00000451976 933 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.28□□□□□ -1.4
ABCA3Q99758 AL355834.1-201ENST00000556602 3965 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC243960.7-201ENST00000623532 707 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 AC000095.2-202ENST00000637415 154 ntBASIC6.28□□□□□ -1.4
ABCA3Q99758 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ABCA3Q99758 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms