Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 AC119674.1-212ENST00000641155 993 ntBASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 MIR193BHG-214ENST00000641765 509 ntBASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
NSMCE2Q96MF7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC126323.6-202ENST00000568092 3511 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC009313.2-201ENST00000417893 1941 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 ZNF733P-202ENST00000444809 1573 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC090181.3-201ENST00000624777 1514 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 RNA5SP433-201ENST00000364491 114 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 NCSTNP1-201ENST00000406229 144 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 RNU2-50P-201ENST00000410494 143 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC099336.2-201ENST00000422457 254 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC069154.1-201ENST00000432914 542 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC245517.2-201ENST00000442890 346 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 EEF1B2P6-201ENST00000445713 673 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC099560.2-201ENST00000457554 255 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC104339.1-201ENST00000465478 348 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC011476.1-201ENST00000466725 307 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 TAS2R6P-201ENST00000605022 826 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 HTR1DP1-201ENST00000616500 888 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MIR8069-1-201ENST00000616627 86 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MIR6737-201ENST00000617385 70 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC074276.2-201ENST00000619891 348 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MIR8069-2-201ENST00000621412 86 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MIR6806-201ENST00000622141 64 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 FO681491.1-202ENST00000623392 737 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 AC007683.2-201ENST00000624681 714 ntBASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.84□□□□□ -1.63
NSMCE2Q96MF7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
NSMCE2Q96MF7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NSMCE2Q96MF7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
NSMCE2Q96MF7 AC092079.1-201ENST00000558620 1985 ntBASIC4.84□□□□□ -1.64
NSMCE2Q96MF7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 MIR133B-201ENST00000362210 119 ntBASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AC093719.1-202ENST00000392735 373 ntBASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 OR4K12P-201ENST00000406538 961 ntBASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AC066692.1-201ENST00000421721 457 ntBASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AC092447.2-201ENST00000435487 669 ntBASIC4.83□□□□□ -1.64
NSMCE2Q96MF7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms