Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HPS3Q969F9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.15□□□□□ -1.43
HPS3Q969F9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
HPS3Q969F9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 RNU5B-1-201ENST00000363286 116 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 RN7SKP69-201ENST00000365390 305 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 RNA5SP284-201ENST00000384547 118 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 MIR137-201ENST00000385223 102 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 SNORA17A-201ENST00000391185 133 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 U3.28-201ENST00000391249 210 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 PEX12P1-201ENST00000400284 1048 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HPS3Q969F9 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 MTATP6P20-201ENST00000414147 562 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 OR6E1P-201ENST00000414424 923 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 RNF10P1-201ENST00000418589 369 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AL133173.1-201ENST00000423458 397 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 HMGB3P5-201ENST00000428894 612 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AL035246.1-201ENST00000433554 1255 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 NDUFB4P8-201ENST00000435351 367 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AC064862.4-201ENST00000442180 334 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 LINC02210-201ENST00000444561 288 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AL450023.1-201ENST00000450868 751 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 LRRC37A14P-201ENST00000452297 462 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 RNU6-1004P-201ENST00000516584 111 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AL132857.1-201ENST00000555180 708 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 ZNF971P-201ENST00000562068 1249 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AC011374.2-201ENST00000607135 526 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AL157392.4-201ENST00000609756 345 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AC011472.4-201ENST00000615848 491 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 AC005618.4-201ENST00000625053 554 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 SNORA17.5-201ENST00000630429 132 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HPS3Q969F9 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HPS3Q969F9 ZNF849P-201ENST00000594711 1566 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HPS3Q969F9 MRRFP1-201ENST00000435941 1675 ntBASIC6.14□□□□□ -1.43
HPS3Q969F9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
HPS3Q969F9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HPS3Q969F9 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HPS3Q969F9 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC004656.1-201ENST00000568479 4951 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 ZNF29P-201ENST00000225587 168 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 RNU6-532P-201ENST00000384318 107 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HPS3Q969F9 AL596448.1-201ENST00000415024 392 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AL133482.1-201ENST00000415988 498 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AC113412.1-201ENST00000425840 504 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 RPL7P56-201ENST00000429441 717 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 BX276092.6-201ENST00000430476 250 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 MTND2P2-201ENST00000434633 945 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.13□□□□□ -1.43
HPS3Q969F9 OR6D1P-201ENST00000436165 939 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 RPL23AP19-201ENST00000436229 369 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 ELOCP11-201ENST00000436690 332 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC000041.1-201ENST00000439655 175 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AC019185.1-201ENST00000442718 389 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 AP000281.1-201ENST00000444036 316 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 MED28P3-201ENST00000444288 531 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 ELOCP16-201ENST00000444494 332 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.13□□□□□ -1.43
HPS3Q969F9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.13□□□□□ -1.43
HPS3Q969F9 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.13□□□□□ -1.43
HPS3Q969F9 BX276092.8-201ENST00000455722 250 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 GTF2IP12-201ENST00000456547 356 ntBASIC6.13□□□□□ -1.43
HPS3Q969F9 ATP5LP5-201ENST00000483050 299 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms