Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 RN7SL517P-201ENST00000462240 305 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 RN7SL98P-201ENST00000462271 300 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 RN7SL810P-201ENST00000493031 276 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 RNU6-709P-201ENST00000517257 104 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 AC007786.3-201ENST00000615154 596 ntBASIC7.94□□□□□ -1.14
TOPBP1Q92547 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TOPBP1Q92547 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TOPBP1Q92547 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 RPL23AP26-201ENST00000412728 464 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 UQCRHP4-201ENST00000471686 272 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 SNORA67.7-201ENST00000516664 135 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC010476.1-201ENST00000519111 851 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 AP003730.1-201ENST00000524605 285 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC025031.4-201ENST00000621248 3271 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 MIR208A-201ENST00000362287 71 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 RNA5SP366-201ENST00000365454 123 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC007618.1-201ENST00000366455 732 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 OR1L6-202ENST00000373684 1044 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 AL451142.1-201ENST00000375867 775 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 RNA5SP241-201ENST00000391326 114 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 snoU13.29-201ENST00000459370 104 ntBASIC7.93□□□□□ -1.14
TOPBP1Q92547 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.93□□□□□ -1.14
TOPBP1Q92547 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 AC011933.1-201ENST00000413334 321 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 AC116533.1-201ENST00000459748 321 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 AC025164.1-201ENST00000496249 478 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 ENPP7P11-201ENST00000505915 627 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 MIR3158-1-201ENST00000583596 81 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 AL162574.1-201ENST00000615702 950 ntBASIC7.92□□□□□ -1.14
TOPBP1Q92547 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.92□□□□□ -1.14
TOPBP1Q92547 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
TOPBP1Q92547 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AL132765.1-201ENST00000434165 553 ntBASIC7.91□□□□□ -1.14
TOPBP1Q92547 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
TOPBP1Q92547 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
TOPBP1Q92547 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.9□□□□□ -1.14
TOPBP1Q92547 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
TOPBP1Q92547 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms