Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC71Q8IV32 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC71Q8IV32 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 Z95331.1-201ENST00000623075 23112 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 RNA5SP443-201ENST00000363083 132 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 MIR589-201ENST00000385238 99 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC007068.1-201ENST00000396690 844 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 VDAC2P1-201ENST00000399358 958 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AL133270.1-201ENST00000402635 279 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 Y_RNA.625-201ENST00000411256 107 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 PRUNEP1-201ENST00000425846 705 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 CYCSP24-201ENST00000445119 316 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC092754.1-201ENST00000472975 479 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC007688.1-201ENST00000475592 759 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC058823.1-201ENST00000485315 474 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 RN7SL97P-201ENST00000486780 299 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 MTND6P2-201ENST00000512226 524 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC022360.1-201ENST00000521058 340 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC009268.1-201ENST00000561352 1203 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 OR1F2P-201ENST00000570470 933 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 MIR4646-201ENST00000580775 63 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC006116.3-201ENST00000592968 361 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC009027.1-201ENST00000604510 479 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 AC012467.1-201ENST00000607740 256 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.84□□□□□ -1.63
CCDC71Q8IV32 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CCDC71Q8IV32 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71Q8IV32 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC71Q8IV32 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC71Q8IV32 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.64
CCDC71Q8IV32 STX3-208ENST00000641815 3236 ntBASIC4.84□□□□□ -1.64
CCDC71Q8IV32 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC71Q8IV32 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 RNU6-670P-201ENST00000364312 104 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 OR4K12P-201ENST00000406538 961 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL139039.2-201ENST00000407436 479 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 RPL34P6-201ENST00000432390 345 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ARL4AP4-201ENST00000434170 518 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 NPM1P33-201ENST00000438918 872 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 GTF3AP5-201ENST00000442645 697 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL389915.2-201ENST00000454576 441 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AP000942.1-201ENST00000463969 747 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 BX284632.1-201ENST00000478218 541 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 SNRPCP2-201ENST00000504370 475 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 NDUFB5P1-201ENST00000508134 564 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 RN7SKP66-201ENST00000516681 231 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AL390726.5-202ENST00000564800 256 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 FAM60CP-201ENST00000591086 664 ntBASIC4.83□□□□□ -1.64
CCDC71Q8IV32 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC71Q8IV32 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms