Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC087783.2-201ENST00000605070 562 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 IMMP1LP1-201ENST00000605170 488 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AL096712.1-201ENST00000614561 159 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AC026368.1-201ENST00000614934 690 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AL356489.2-201ENST00000566968 3528 ntBASIC4.45□□□□□ -1.7
CCDC58Q4VC31 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC58Q4VC31 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 IRF5P1-201ENST00000504852 2164 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC092435.4-201ENST00000623012 4159 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 MIR448-201ENST00000362131 111 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SNORA73.1-201ENST00000363107 205 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 RNU6-178P-201ENST00000384631 104 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 RPL21P108-201ENST00000413857 481 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SLC35E1P1-201ENST00000419313 864 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AL390119.1-201ENST00000440329 312 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AL450023.3-201ENST00000440592 271 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 RPL7P45-201ENST00000455851 743 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 Z92846.1-201ENST00000456203 268 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC107015.1-201ENST00000466902 747 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SIAH1P1-201ENST00000479411 923 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 RPS4XP20-201ENST00000505751 772 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 GSTP1P1-201ENST00000548078 319 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC122134.1-201ENST00000565664 1104 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC004948.1-201ENST00000609858 672 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 RPSAP73-201ENST00000614820 330 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SAMMSON-209ENST00000641222 1100 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 MTND5P23-201ENST00000430812 1655 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 SSXP3-201ENST00000442971 1300 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 DDX18P5-201ENST00000534547 1306 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC58Q4VC31 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RNA5SP513-201ENST00000364648 118 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 LRRC37BP1-201ENST00000398851 714 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AL391422.1-201ENST00000402155 436 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 QRSL1P2-201ENST00000418582 964 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AL133325.1-201ENST00000421090 382 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 EIF4HP2-201ENST00000424380 563 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 FAM96AP1-201ENST00000430879 482 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RPS29P9-201ENST00000440360 171 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RHEBP2-201ENST00000450289 600 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RPS17P2-201ENST00000461663 408 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 AC100832.1-201ENST00000471945 383 ntBASIC4.43□□□□□ -1.7
CCDC58Q4VC31 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC58Q4VC31 RN7SL817P-201ENST00000480777 288 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms