Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 AC018529.3-201ENST00000624212 2254 ntBASIC4.24□□□□□ -1.73
USF2Q15853 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.24□□□□□ -1.73
USF2Q15853 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.24□□□□□ -1.73
USF2Q15853 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
USF2Q15853 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USF2Q15853 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF2Q15853 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 OR52B3P-201ENST00000314715 928 ntBASIC4.23□□□□□ -1.73
USF2Q15853 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USF2Q15853 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 AC013442.1-201ENST00000397347 228 ntBASIC4.23□□□□□ -1.73
USF2Q15853 RPL23AP48-201ENST00000406913 488 ntBASIC4.23□□□□□ -1.73
USF2Q15853 RN7SKP222-201ENST00000410651 315 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AL590806.1-201ENST00000415818 853 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.23□□□□□ -1.73
USF2Q15853 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.23□□□□□ -1.73
USF2Q15853 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 AP000281.1-201ENST00000444036 316 ntBASIC4.23□□□□□ -1.73
USF2Q15853 VDAC2P4-201ENST00000452925 711 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC011476.1-201ENST00000466725 307 ntBASIC4.23□□□□□ -1.73
USF2Q15853 NDUFA5P5-201ENST00000468361 342 ntBASIC4.23□□□□□ -1.73
USF2Q15853 RPS26P39-201ENST00000469206 341 ntBASIC4.23□□□□□ -1.73
USF2Q15853 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.23□□□□□ -1.73
USF2Q15853 AC010627.1-201ENST00000503819 1294 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC073358.1-201ENST00000505671 684 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC016559.2-201ENST00000510759 359 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.23□□□□□ -1.73
USF2Q15853 RNA5SP271-201ENST00000516700 88 ntBASIC4.23□□□□□ -1.73
USF2Q15853 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.23□□□□□ -1.73
USF2Q15853 MTCYBP13-201ENST00000578634 1093 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AP005403.1-201ENST00000579720 229 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.23□□□□□ -1.73
USF2Q15853 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.23□□□□□ -1.73
USF2Q15853 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 AC084373.1-201ENST00000603311 235 ntBASIC4.23□□□□□ -1.73
USF2Q15853 AC009237.17-201ENST00000618111 748 ntBASIC4.23□□□□□ -1.73
USF2Q15853 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.23□□□□□ -1.73
USF2Q15853 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USF2Q15853 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.23□□□□□ -1.73
USF2Q15853 AL592437.2-201ENST00000421655 2434 ntBASIC4.23□□□□□ -1.73
USF2Q15853 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.22□□□□□ -1.73
USF2Q15853 AC106872.5-201ENST00000508856 1416 ntBASIC4.22□□□□□ -1.73
USF2Q15853 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.22□□□□□ -1.73
USF2Q15853 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
USF2Q15853 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 RNA5SP28-201ENST00000363841 119 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
USF2Q15853 COX5BP7-201ENST00000414780 274 ntBASIC4.22□□□□□ -1.73
USF2Q15853 Z93019.1-201ENST00000416450 973 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 RCC2P2-201ENST00000422174 918 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC073069.1-201ENST00000428657 441 ntBASIC4.22□□□□□ -1.73
USF2Q15853 RPL19P16-201ENST00000433839 588 ntBASIC4.22□□□□□ -1.73
USF2Q15853 OR6D1P-201ENST00000436165 939 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC005297.1-201ENST00000444765 862 ntBASIC4.22□□□□□ -1.73
USF2Q15853 RPL7P31-201ENST00000450192 724 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AC239809.1-201ENST00000450470 217 ntBASIC4.22□□□□□ -1.73
USF2Q15853 PRPF38AP1-201ENST00000451976 933 ntBASIC4.22□□□□□ -1.73
USF2Q15853 FGF7P3-201ENST00000454645 303 ntBASIC4.22□□□□□ -1.73
USF2Q15853 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 IGBP1P4-201ENST00000503202 879 ntBASIC4.22□□□□□ -1.73
USF2Q15853 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USF2Q15853 CDC42P3-201ENST00000518493 633 ntBASIC4.22□□□□□ -1.73
USF2Q15853 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.22□□□□□ -1.73
USF2Q15853 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.22□□□□□ -1.73
USF2Q15853 IGBP1P1-201ENST00000554337 1009 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.22□□□□□ -1.73
USF2Q15853 MIR4716-201ENST00000579628 84 ntBASIC4.22□□□□□ -1.73
USF2Q15853 AP001496.3-201ENST00000580230 913 ntBASIC4.22□□□□□ -1.73
USF2Q15853 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms