Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RPL26P30-202ENST00000602923 645 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC108359.1-201ENST00000616451 1211 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC067931.1-201ENST00000624190 671 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC135068.12-201ENST00000637370 931 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 MIR323A-201ENST00000362199 86 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 SNORA17A-201ENST00000391185 133 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RN7SKP59-201ENST00000410520 314 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RN7SKP293-201ENST00000411389 296 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 ATG4AP1-201ENST00000416893 538 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RPS12P5-201ENST00000423449 371 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC004980.3-201ENST00000447046 365 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RBMY2TP-201ENST00000451162 947 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC093166.2-201ENST00000455969 1017 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 RN7SL717P-201ENST00000478343 297 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC090686.1-201ENST00000481577 749 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL589674.2-201ENST00000604304 337 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 AL034374.2-201ENST00000605281 548 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 uc_338.18-201ENST00000615451 175 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 SNORA17.5-201ENST00000630429 132 ntBASIC3.86□□□□□ -1.79
HIST1H1AQ02539 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.86□□□□□ -1.79
HIST1H1AQ02539 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 OR56A4-201ENST00000330728 1209 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 MIR600-201ENST00000385007 98 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-1320P-201ENST00000390838 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-1269P-201ENST00000391139 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AL391422.1-201ENST00000402155 436 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AL356968.2-201ENST00000412769 1257 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 OR2X1P-201ENST00000421144 687 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 GAPDHP49-201ENST00000421421 961 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AL139148.1-201ENST00000427122 680 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RPS26P4-201ENST00000431743 355 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RPS27AP2-201ENST00000457576 465 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-599P-201ENST00000459383 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RNU6-1193P-201ENST00000459461 107 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RN7SL184P-201ENST00000488308 297 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 RPS4XP20-201ENST00000505751 772 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC097173.1-201ENST00000505862 819 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 STMN1P2-201ENST00000508435 439 ntBASIC3.85□□□□□ -1.79
HIST1H1AQ02539 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.85□□□□□ -1.79
HIST1H1AQ02539 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms