Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 SNORA70-201ENST00000384436 135 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 AL035079.1-201ENST00000405210 287 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AC007738.1-201ENST00000413892 348 ntBASIC4.83□□□□□ -1.64
SKP1P63208 HYALP1-201ENST00000417674 1279 ntBASIC4.83□□□□□ -1.64
SKP1P63208 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SKP1P63208 TMX2P1-201ENST00000436507 708 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AC092647.3-201ENST00000443044 633 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AC110749.1-201ENST00000462007 357 ntBASIC4.83□□□□□ -1.64
SKP1P63208 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 HMGN2P25-201ENST00000486956 268 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
SKP1P63208 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.83□□□□□ -1.64
SKP1P63208 AC130364.2-201ENST00000528639 604 ntBASIC4.83□□□□□ -1.64
SKP1P63208 OR7E128P-201ENST00000532736 1024 ntBASIC4.83□□□□□ -1.64
SKP1P63208 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 EDDM3DP-201ENST00000554692 434 ntBASIC4.83□□□□□ -1.64
SKP1P63208 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.83□□□□□ -1.64
SKP1P63208 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 NPM1P45-201ENST00000583151 559 ntBASIC4.83□□□□□ -1.64
SKP1P63208 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.83□□□□□ -1.64
SKP1P63208 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SKP1P63208 AL450345.1-202ENST00000605741 3881 ntBASIC4.82□□□□□ -1.64
SKP1P63208 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.82□□□□□ -1.64
SKP1P63208 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SKP1P63208 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 AL078599.1-201ENST00000402075 293 ntBASIC4.82□□□□□ -1.64
SKP1P63208 SPTLC1P2-201ENST00000407089 121 ntBASIC4.82□□□□□ -1.64
SKP1P63208 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 COX5BP7-201ENST00000414780 274 ntBASIC4.82□□□□□ -1.64
SKP1P63208 AC093162.1-201ENST00000419682 124 ntBASIC4.82□□□□□ -1.64
SKP1P63208 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 UBE2V2P4-201ENST00000447495 259 ntBASIC4.82□□□□□ -1.64
SKP1P63208 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 PRPF38AP1-201ENST00000451976 933 ntBASIC4.82□□□□□ -1.64
SKP1P63208 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 RNA5SP230-201ENST00000517039 122 ntBASIC4.82□□□□□ -1.64
SKP1P63208 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.82□□□□□ -1.64
SKP1P63208 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 AC027369.5-201ENST00000533838 755 ntBASIC4.82□□□□□ -1.64
SKP1P63208 LSM3P2-201ENST00000551246 273 ntBASIC4.82□□□□□ -1.64
SKP1P63208 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.82□□□□□ -1.64
SKP1P63208 AC087763.1-201ENST00000603391 286 ntBASIC4.82□□□□□ -1.64
SKP1P63208 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.82□□□□□ -1.64
SKP1P63208 AC068870.2-201ENST00000620635 389 ntBASIC4.82□□□□□ -1.64
SKP1P63208 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.82□□□□□ -1.64
SKP1P63208 FRG1EP-201ENST00000634469 770 ntBASIC4.82□□□□□ -1.64
SKP1P63208 LINC01739-205ENST00000641890 573 ntBASIC4.82□□□□□ -1.64
SKP1P63208 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SKP1P63208 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.82□□□□□ -1.64
SKP1P63208 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SKP1P63208 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SKP1P63208 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SKP1P63208 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.81□□□□□ -1.64
SKP1P63208 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SKP1P63208 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.81□□□□□ -1.64
SKP1P63208 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SKP1P63208 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SKP1P63208 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms