Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNA5SP271-201ENST00000516700 88 ntBASIC5.06□□□□□ -1.6
CDH12P55289 SCARNA20.4-201ENST00000516969 131 ntBASIC5.06□□□□□ -1.6
CDH12P55289 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH12P55289 EEF1A1P37-201ENST00000522748 715 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC024405.1-201ENST00000532521 1042 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.06□□□□□ -1.6
CDH12P55289 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.06□□□□□ -1.6
CDH12P55289 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AL160237.3-201ENST00000604114 1013 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC009974.1-201ENST00000608881 455 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC004908.3-201ENST00000610248 625 ntBASIC5.06□□□□□ -1.6
CDH12P55289 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AL359513.1-201ENST00000614364 557 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC091932.2-201ENST00000623014 291 ntBASIC5.06□□□□□ -1.6
CDH12P55289 AC006963.1-201ENST00000624003 1052 ntBASIC5.06□□□□□ -1.6
CDH12P55289 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH12P55289 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC129915.3-201ENST00000634128 948 ntBASIC5.06□□□□□ -1.6
CDH12P55289 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AC073869.8-201ENST00000641806 335 ntBASIC5.06□□□□□ -1.6
CDH12P55289 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 MTCO1P7-201ENST00000419523 1542 ntBASIC5.06□□□□□ -1.6
CDH12P55289 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
CDH12P55289 AL450345.1-202ENST00000605741 3881 ntBASIC5.06□□□□□ -1.6
CDH12P55289 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
CDH12P55289 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.06□□□□□ -1.6
CDH12P55289 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDH12P55289 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
CDH12P55289 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AP005432.1-201ENST00000580891 3485 ntBASIC5.05□□□□□ -1.6
CDH12P55289 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 SEPT7P7-201ENST00000420492 1301 ntBASIC5.05□□□□□ -1.6
CDH12P55289 SSXP3-201ENST00000442971 1300 ntBASIC5.05□□□□□ -1.6
CDH12P55289 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH12P55289 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CDH12P55289 OR9K1P-201ENST00000326513 941 ntBASIC5.05□□□□□ -1.6
CDH12P55289 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDH12P55289 RNA5SP131-201ENST00000365452 119 ntBASIC5.05□□□□□ -1.6
CDH12P55289 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 ATP5HP3-201ENST00000396994 486 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 RPS3AP2-201ENST00000407190 754 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AC093084.1-201ENST00000424233 687 ntBASIC5.05□□□□□ -1.6
CDH12P55289 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.05□□□□□ -1.6
CDH12P55289 HMGN2P27-201ENST00000427352 270 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AC093716.1-201ENST00000435923 377 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 MTCO1P53-201ENST00000441633 699 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC016772.1-201ENST00000444170 1261 ntBASIC5.05□□□□□ -1.6
CDH12P55289 MTND1P33-201ENST00000446251 917 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH12P55289 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 MTND2P8-201ENST00000450555 1025 ntBASIC5.05□□□□□ -1.6
CDH12P55289 CYCSP42-201ENST00000450823 238 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC239798.3-201ENST00000454459 408 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC011476.1-201ENST00000466725 307 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AP000797.2-201ENST00000475768 606 ntBASIC5.05□□□□□ -1.6
CDH12P55289 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AC098583.1-201ENST00000480875 255 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC107398.1-201ENST00000486904 505 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AL049874.2-201ENST00000492636 288 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AC020699.1-201ENST00000505161 445 ntBASIC5.05□□□□□ -1.6
CDH12P55289 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH12P55289 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 HPRT1P1-201ENST00000509498 657 ntBASIC5.05□□□□□ -1.6
CDH12P55289 RNU6-615P-201ENST00000516065 106 ntBASIC5.05□□□□□ -1.6
CDH12P55289 RN7SKP34-201ENST00000516142 244 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 OR8G3P-201ENST00000533406 921 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC139103.1-201ENST00000534696 1030 ntBASIC5.05□□□□□ -1.6
CDH12P55289 LRRC34P1-201ENST00000542742 915 ntBASIC5.05□□□□□ -1.6
CDH12P55289 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.05□□□□□ -1.6
CDH12P55289 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH12P55289 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH12P55289 AL132857.1-201ENST00000555180 708 ntBASIC5.05□□□□□ -1.6
CDH12P55289 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH12P55289 AP005403.1-201ENST00000579720 229 ntBASIC5.05□□□□□ -1.6
CDH12P55289 MIR4271-201ENST00000582451 67 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms