Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CLCNKAP51800 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLCNKAP51800 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLCNKAP51800 AC100757.1-201ENST00000616872 1835 ntBASIC5.25□□□□□ -1.57
CLCNKAP51800 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CLCNKAP51800 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCNKAP51800 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLCNKAP51800 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AC002525.1-201ENST00000624392 1622 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 MIR620-201ENST00000385232 95 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 MORF4L1P7-201ENST00000426038 703 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC245047.2-201ENST00000441060 530 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 SUMO2P1-206ENST00000445436 284 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 BUD31P2-201ENST00000449374 300 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 HSPE1P22-201ENST00000456856 327 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC104629.2-201ENST00000468627 598 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 AP000797.2-201ENST00000475768 606 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 STRADBP1-201ENST00000478954 1281 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 RN7SL423P-201ENST00000486202 304 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 HIGD1AP14-201ENST00000507617 282 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 RNA5SP373-201ENST00000517271 95 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 HMGB1P46-201ENST00000520062 610 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 MTND1P6-201ENST00000523621 946 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 HAUS8P1-201ENST00000549005 542 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AC093510.2-201ENST00000562820 896 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 MIR4660-201ENST00000583549 74 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 MIR7853-201ENST00000584820 132 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AC013244.1-201ENST00000604279 193 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC009027.1-201ENST00000604510 479 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AL391834.2-201ENST00000609982 546 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC126915.2-201ENST00000610957 190 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC015922.4-201ENST00000612568 690 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 AC097460.3-201ENST00000623099 442 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AP003400.3-201ENST00000624904 346 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.24□□□□□ -1.57
CLCNKAP51800 CYP4F35P-202ENST00000636121 390 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AP001029.2-203ENST00000589795 4910 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 AL034549.2-201ENST00000618285 3373 ntBASIC5.24□□□□□ -1.57
CLCNKAP51800 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CLCNKAP51800 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
CLCNKAP51800 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLCNKAP51800 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCNKAP51800 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCNKAP51800 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCNKAP51800 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCNKAP51800 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCNKAP51800 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLCNKAP51800 MIR105-1-201ENST00000385222 81 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCNKAP51800 EI24P3-201ENST00000399046 1062 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AL353692.2-201ENST00000407054 335 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AC079809.1-201ENST00000415468 276 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 OR51A6P-201ENST00000418680 1004 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCNKAP51800 AC005033.1-201ENST00000428904 813 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AL136231.1-201ENST00000429407 730 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 RPS26P4-201ENST00000431743 355 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCNKAP51800 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.23□□□□□ -1.57
CLCNKAP51800 AL389915.2-201ENST00000454576 441 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLCNKAP51800 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.23□□□□□ -1.57
CLCNKAP51800 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLCNKAP51800 RN7SL222P-201ENST00000476452 299 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AC058823.1-201ENST00000485315 474 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 OR9N1P-202ENST00000494289 481 ntBASIC5.23□□□□□ -1.57
CLCNKAP51800 AC015864.1-201ENST00000496512 544 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms