Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RPL34P6-201ENST00000432390 345 ntBASIC8.45□□□□□ -1.06
SMARCA4P51532 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.45□□□□□ -1.06
SMARCA4P51532 AC111000.6-201ENST00000514471 709 ntBASIC8.45□□□□□ -1.06
SMARCA4P51532 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC8.45□□□□□ -1.06
SMARCA4P51532 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
SMARCA4P51532 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SMARCA4P51532 CARF-203ENST00000414439 2099 ntTSL 2 BASIC8.45□□□□□ -1.06
SMARCA4P51532 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.45□□□□□ -1.06
SMARCA4P51532 VN2R3P-201ENST00000422626 1412 ntBASIC8.45□□□□□ -1.06
SMARCA4P51532 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 AL121657.1-201ENST00000327215 531 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SMARCA4P51532 RNA5SP171-201ENST00000391071 115 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 NRBF2P2-201ENST00000413087 861 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 RPL36AP36-201ENST00000418616 301 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC8.44□□□□□ -1.06
SMARCA4P51532 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.44□□□□□ -1.06
SMARCA4P51532 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 ARF4P1-201ENST00000605447 541 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 OR7A19P-201ENST00000608051 733 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 CASC19-255ENST00000641733 1385 ntBASIC8.44□□□□□ -1.06
SMARCA4P51532 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
SMARCA4P51532 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
SMARCA4P51532 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC8.44□□□□□ -1.06
SMARCA4P51532 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
SMARCA4P51532 RNU1-130P-201ENST00000363930 160 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 AL359837.1-201ENST00000381357 287 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 AC016559.2-201ENST00000510759 359 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC8.43□□□□□ -1.06
SMARCA4P51532 AP001160.4-201ENST00000596971 382 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 AC008785.1-201ENST00000624475 456 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SMARCA4P51532 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.43□□□□□ -1.06
SMARCA4P51532 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.43□□□□□ -1.06
SMARCA4P51532 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.43□□□□□ -1.06
SMARCA4P51532 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SMARCA4P51532 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.43□□□□□ -1.06
SMARCA4P51532 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SMARCA4P51532 AL731532.1-201ENST00000623972 4236 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 PPIAP31-201ENST00000405422 495 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 GPS2P1-201ENST00000411761 986 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 PHBP16-201ENST00000446318 950 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 RN7SL303P-201ENST00000469773 251 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 Y_RNA.719-201ENST00000517156 106 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
SMARCA4P51532 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.43□□□□□ -1.06
SMARCA4P51532 NOL8P1-201ENST00000508336 3529 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 AC090017.1-201ENST00000548612 1779 ntBASIC8.43□□□□□ -1.06
SMARCA4P51532 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SMARCA4P51532 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
SMARCA4P51532 AC011447.7-201ENST00000624228 1590 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SMARCA4P51532 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC8.42□□□□□ -1.06
SMARCA4P51532 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.42□□□□□ -1.06
SMARCA4P51532 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
SMARCA4P51532 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SMARCA4P51532 AC034229.2-201ENST00000566945 2508 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 RNU1-85P-201ENST00000364127 164 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 RNU4-64P-201ENST00000410795 131 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.42□□□□□ -1.06
SMARCA4P51532 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 SCARNA10-201ENST00000459255 330 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 RN7SL810P-201ENST00000493031 276 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 HNRNPRP2-201ENST00000528421 743 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 AC025884.1-201ENST00000556034 378 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.42□□□□□ -1.06
SMARCA4P51532 AC006130.2-201ENST00000586202 326 ntBASIC8.42□□□□□ -1.06
SMARCA4P51532 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.42□□□□□ -1.06
SMARCA4P51532 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
SMARCA4P51532 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms