Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CASP4P49662 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 AC123912.3-201ENST00000600907 1367 ntBASIC5.33□□□□□ -1.56
CASP4P49662 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 CR383656.5-201ENST00000547616 1340 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AL929601.4-201ENST00000613011 1341 ntBASIC5.33□□□□□ -1.56
CASP4P49662 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CASP4P49662 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CASP4P49662 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 SNORA51.8-201ENST00000384234 132 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AL109941.1-201ENST00000401925 229 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AP002530.1-201ENST00000405705 684 ntBASIC5.33□□□□□ -1.56
CASP4P49662 CTSL3P-202ENST00000412179 788 ntBASIC5.33□□□□□ -1.56
CASP4P49662 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.33□□□□□ -1.56
CASP4P49662 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.33□□□□□ -1.56
CASP4P49662 OR2AM1P-201ENST00000422137 422 ntBASIC5.33□□□□□ -1.56
CASP4P49662 RGS17P1-201ENST00000423358 553 ntBASIC5.33□□□□□ -1.56
CASP4P49662 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.33□□□□□ -1.56
CASP4P49662 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 AC027308.1-201ENST00000517993 110 ntBASIC5.33□□□□□ -1.56
CASP4P49662 KCTD9P6-201ENST00000522306 950 ntBASIC5.33□□□□□ -1.56
CASP4P49662 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.33□□□□□ -1.56
CASP4P49662 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.33□□□□□ -1.56
CASP4P49662 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.33□□□□□ -1.56
CASP4P49662 AC006363.1-201ENST00000603806 463 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AC022960.2-201ENST00000616300 666 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AC091905.4-201ENST00000623432 202 ntBASIC5.33□□□□□ -1.56
CASP4P49662 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CASP4P49662 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CASP4P49662 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CASP4P49662 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CASP4P49662 AC099654.2-201ENST00000433031 1980 ntBASIC5.33□□□□□ -1.56
CASP4P49662 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.33□□□□□ -1.56
CASP4P49662 CDC27P2-201ENST00000425026 1922 ntBASIC5.33□□□□□ -1.56
CASP4P49662 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.32□□□□□ -1.56
CASP4P49662 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CASP4P49662 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.32□□□□□ -1.56
CASP4P49662 AL589647.1-201ENST00000402485 466 ntBASIC5.32□□□□□ -1.56
CASP4P49662 Z97832.1-201ENST00000402490 328 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AL021331.1-201ENST00000402817 582 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.32□□□□□ -1.56
CASP4P49662 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.32□□□□□ -1.56
CASP4P49662 GTF3AP5-201ENST00000442645 697 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.32□□□□□ -1.56
CASP4P49662 AC116562.1-201ENST00000485355 781 ntBASIC5.32□□□□□ -1.56
CASP4P49662 RPL32P9-201ENST00000487963 407 ntBASIC5.32□□□□□ -1.56
CASP4P49662 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.32□□□□□ -1.56
CASP4P49662 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.32□□□□□ -1.56
CASP4P49662 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CASP4P49662 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.32□□□□□ -1.56
CASP4P49662 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.32□□□□□ -1.56
CASP4P49662 AL137246.1-201ENST00000607072 977 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC010424.2-201ENST00000607594 443 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AL021707.7-201ENST00000607991 416 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC211433.2-201ENST00000608433 387 ntBASIC5.32□□□□□ -1.56
CASP4P49662 OR51C1P-201ENST00000608504 942 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC087385.3-201ENST00000620477 187 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC068870.2-201ENST00000620635 389 ntBASIC5.32□□□□□ -1.56
CASP4P49662 AC112694.2-201ENST00000623697 768 ntBASIC5.32□□□□□ -1.56
CASP4P49662 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CASP4P49662 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CASP4P49662 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.32□□□□□ -1.56
CASP4P49662 INTS6P1-201ENST00000504674 2530 ntBASIC5.32□□□□□ -1.56
CASP4P49662 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CASP4P49662 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CASP4P49662 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.31□□□□□ -1.56
CASP4P49662 AC003985.2-201ENST00000562268 1669 ntBASIC5.31□□□□□ -1.56
CASP4P49662 ZNF652P1-201ENST00000442420 1309 ntBASIC5.31□□□□□ -1.56
CASP4P49662 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CASP4P49662 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.31□□□□□ -1.56
CASP4P49662 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CASP4P49662 AC007068.1-201ENST00000396690 844 ntBASIC5.31□□□□□ -1.56
CASP4P49662 AC002524.1-201ENST00000411687 547 ntBASIC5.31□□□□□ -1.56
CASP4P49662 TMBIM7P-201ENST00000418074 855 ntBASIC5.31□□□□□ -1.56
CASP4P49662 AC092162.1-201ENST00000432828 434 ntBASIC5.31□□□□□ -1.56
CASP4P49662 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.31□□□□□ -1.56
CASP4P49662 AC012512.1-201ENST00000446594 718 ntBASIC5.31□□□□□ -1.56
CASP4P49662 GYG1P1-201ENST00000460864 698 ntBASIC5.31□□□□□ -1.56
CASP4P49662 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CASP4P49662 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.31□□□□□ -1.56
CASP4P49662 RNA5SP249-201ENST00000516127 99 ntBASIC5.31□□□□□ -1.56
CASP4P49662 RNU6-943P-201ENST00000516960 98 ntBASIC5.31□□□□□ -1.56
CASP4P49662 EIF4A2P5-201ENST00000529914 499 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms