Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL355816.2-201ENST00000610049 647 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 MIR6721-201ENST00000617181 87 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AL445528.2-201ENST00000620582 470 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AP001052.1-201ENST00000626421 99 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.48□□□□□ -1.69
NKX2-1P43699 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 PDZK1P1-202ENST00000425209 1350 ntBASIC4.48□□□□□ -1.69
NKX2-1P43699 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
NKX2-1P43699 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NKX2-1P43699 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 GTF2H2B-203ENST00000508065 1432 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AP002784.2-201ENST00000397300 549 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 CTSL3P-202ENST00000412179 788 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 RPL12P9-201ENST00000412942 488 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 TCEA1P4-201ENST00000415066 844 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC008173.1-201ENST00000418901 264 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC093422.3-201ENST00000428506 305 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 HMGN1P5-201ENST00000448591 263 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 RPL7AP52-201ENST00000458096 790 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 RPL9P15-201ENST00000491096 532 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 RPS12P31-201ENST00000491419 398 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 TPT1P3-201ENST00000492841 512 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC106822.1-201ENST00000502647 526 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC122718.2-201ENST00000505325 591 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 SCARNA20.4-201ENST00000516969 131 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 IGKV2D-10-201ENST00000520194 281 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC100784.1-201ENST00000522790 310 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC027369.5-201ENST00000533838 755 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 NANOGNBP2-201ENST00000544753 553 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC022884.3-201ENST00000579571 248 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 RPAP2P1-201ENST00000603626 1168 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC006363.1-201ENST00000603806 463 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 MIR7973-1-201ENST00000614683 76 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC004801.6-201ENST00000616571 978 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC244100.4-201ENST00000617747 388 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC073869.8-201ENST00000641806 335 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC004817.4-201ENST00000602396 3625 ntBASIC4.47□□□□□ -1.69
NKX2-1P43699 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-1P43699 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-1P43699 AC093225.1-201ENST00000506867 1408 ntBASIC4.46□□□□□ -1.69
NKX2-1P43699 AL603750.1-201ENST00000624216 1717 ntBASIC4.46□□□□□ -1.69
NKX2-1P43699 BX005019.1-201ENST00000561881 1810 ntBASIC4.46□□□□□ -1.69
NKX2-1P43699 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
NKX2-1P43699 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NKX2-1P43699 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms