Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 PTMAP5-201ENST00000393073 333 ntBASIC5.1□□□□□ -1.59
HTTP42858 VN1R37P-201ENST00000419096 748 ntBASIC5.1□□□□□ -1.59
HTTP42858 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 OR5BC1P-201ENST00000529327 739 ntBASIC5.1□□□□□ -1.59
HTTP42858 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
HTTP42858 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HTTP42858 AC093249.4-201ENST00000564755 259 ntBASIC5.1□□□□□ -1.59
HTTP42858 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HTTP42858 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 AC108467.2-201ENST00000617640 1597 ntBASIC5.1□□□□□ -1.59
HTTP42858 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HTTP42858 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 RPL23AP38-201ENST00000423801 469 ntBASIC5.1□□□□□ -1.59
HTTP42858 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.1□□□□□ -1.59
HTTP42858 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HTTP42858 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HTTP42858 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HTTP42858 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HTTP42858 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.1□□□□□ -1.59
HTTP42858 AL050321.1-201ENST00000432363 400 ntBASIC5.1□□□□□ -1.59
HTTP42858 GAPDHP14-201ENST00000450472 937 ntBASIC5.1□□□□□ -1.59
HTTP42858 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.1□□□□□ -1.59
HTTP42858 AC112230.1-201ENST00000604342 547 ntBASIC5.1□□□□□ -1.59
HTTP42858 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.1□□□□□ -1.59
HTTP42858 AC011447.7-201ENST00000624228 1590 ntBASIC5.09□□□□□ -1.59
HTTP42858 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HTTP42858 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HTTP42858 RN7SKP17-201ENST00000411242 351 ntBASIC5.09□□□□□ -1.59
HTTP42858 TPT1P2-201ENST00000413105 503 ntBASIC5.09□□□□□ -1.59
HTTP42858 E2F6P2-201ENST00000420708 748 ntBASIC5.09□□□□□ -1.59
HTTP42858 PGBD4P4-201ENST00000509673 613 ntBASIC5.09□□□□□ -1.59
HTTP42858 RNA5SP49-201ENST00000516450 115 ntBASIC5.09□□□□□ -1.59
HTTP42858 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.09□□□□□ -1.59
HTTP42858 SNORA51-201ENST00000606420 132 ntBASIC5.09□□□□□ -1.59
HTTP42858 AC112484.5-201ENST00000624189 228 ntBASIC5.09□□□□□ -1.59
HTTP42858 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HTTP42858 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HTTP42858 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HTTP42858 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.09□□□□□ -1.59
HTTP42858 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.09□□□□□ -1.59
HTTP42858 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.09□□□□□ -1.59
HTTP42858 AC016550.3-201ENST00000515706 767 ntBASIC5.09□□□□□ -1.59
HTTP42858 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
HTTP42858 MIR7151-201ENST00000617477 60 ntBASIC5.09□□□□□ -1.59
HTTP42858 AC021422.1-201ENST00000621212 473 ntBASIC5.09□□□□□ -1.59
HTTP42858 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.09□□□□□ -1.6
HTTP42858 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HTTP42858 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
HTTP42858 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HTTP42858 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
HTTP42858 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
HTTP42858 AP000756.2-201ENST00000624168 2567 ntBASIC5.08□□□□□ -1.6
HTTP42858 AC092681.1-201ENST00000297369 291 ntBASIC5.08□□□□□ -1.6
HTTP42858 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 AC097374.1-203ENST00000400783 485 ntBASIC5.08□□□□□ -1.6
HTTP42858 EIF4A1P3-201ENST00000411521 244 ntBASIC5.08□□□□□ -1.6
HTTP42858 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.08□□□□□ -1.6
HTTP42858 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.08□□□□□ -1.6
HTTP42858 AC007967.1-201ENST00000455422 1159 ntBASIC5.08□□□□□ -1.6
HTTP42858 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.08□□□□□ -1.6
HTTP42858 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.08□□□□□ -1.6
HTTP42858 AC027369.5-201ENST00000533838 755 ntBASIC5.08□□□□□ -1.6
HTTP42858 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.08□□□□□ -1.6
HTTP42858 AC020634.1-201ENST00000608701 549 ntBASIC5.08□□□□□ -1.6
HTTP42858 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.08□□□□□ -1.6
HTTP42858 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.08□□□□□ -1.6
HTTP42858 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HTTP42858 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.08□□□□□ -1.6
HTTP42858 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms