Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC131971.1-201ENST00000332881 1482 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AL353625.1-202ENST00000366273 571 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 OR13C3-201ENST00000374781 1108 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 AL645733.1-201ENST00000402250 217 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM23P36406 RN7SKP114-201ENST00000410327 279 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AC013470.3-201ENST00000420252 1194 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 RPL19P16-201ENST00000433839 588 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM23P36406 NDUFA5P8-201ENST00000449019 346 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM23P36406 HMGN2P25-201ENST00000486956 268 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 AC097173.1-201ENST00000505862 819 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 IMPA1P1-201ENST00000510718 842 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM23P36406 RN7SKP260-201ENST00000516907 149 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM23P36406 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
TRIM23P36406 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM23P36406 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM23P36406 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM23P36406 AL049874.4-201ENST00000557593 255 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 AC096553.1-201ENST00000605169 829 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM23P36406 AP005432.2-201ENST00000608162 586 ntBASIC5.1□□□□□ -1.59
TRIM23P36406 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM23P36406 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM23P36406 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM23P36406 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
TRIM23P36406 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM23P36406 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM23P36406 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
TRIM23P36406 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM23P36406 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 GAPDHP15-201ENST00000398586 975 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AL133270.1-201ENST00000402635 279 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM23P36406 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AC090018.1-201ENST00000434369 367 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM23P36406 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 RPL12P3-201ENST00000440080 396 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM23P36406 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM23P36406 NDUFB5P1-201ENST00000508134 564 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AC110775.1-201ENST00000513721 462 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 RNU6-551P-201ENST00000516661 103 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 OR5AZ1P-201ENST00000527448 943 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM23P36406 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM23P36406 BNIP3P32-201ENST00000600015 554 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AC008536.1-201ENST00000602872 669 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
TRIM23P36406 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.09□□□□□ -1.59
TRIM23P36406 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM23P36406 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM23P36406 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM23P36406 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM23P36406 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
TRIM23P36406 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
TRIM23P36406 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM23P36406 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TRIM23P36406 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM23P36406 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM23P36406 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TRIM23P36406 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM23P36406 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM23P36406 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM23P36406 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM23P36406 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM23P36406 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
TRIM23P36406 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
TRIM23P36406 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM23P36406 MIR550A3-201ENST00000390735 95 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms