Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC13P31276 RNA5SP305-201ENST00000362665 119 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 SNORA51.8-201ENST00000384234 132 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC13P31276 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 RPS26P47-201ENST00000427219 348 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC13P31276 ARL4AP4-201ENST00000434170 518 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC13P31276 snoU13.20-201ENST00000459180 104 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 PPIAP21-201ENST00000464473 501 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 AC092754.1-201ENST00000472975 479 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 AC007686.1-201ENST00000488511 463 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 SNRPCP2-201ENST00000504370 475 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC13P31276 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 BTG4P1-201ENST00000510421 183 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC104997.1-201ENST00000519761 717 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 OR5AZ1P-201ENST00000527448 943 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC005341.1-201ENST00000571086 708 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC13P31276 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC13P31276 HMGB1P51-201ENST00000605166 638 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC13P31276 AP002799.1-201ENST00000623552 423 ntBASIC5.55□□□□□ -1.52
HOXC13P31276 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC13P31276 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXC13P31276 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC13P31276 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC13P31276 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
HOXC13P31276 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC13P31276 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC13P31276 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC13P31276 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC13P31276 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 ASNSP1-201ENST00000518311 1939 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 RNA5SP123-201ENST00000363244 119 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC13P31276 SNORA70.6-201ENST00000383934 134 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXC13P31276 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 U3.36-201ENST00000408418 213 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 RN7SKP247-201ENST00000411094 308 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AL121878.1-201ENST00000418638 859 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 OR6C64P-201ENST00000419708 825 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC017019.1-201ENST00000426129 261 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AL158073.1-201ENST00000426848 1104 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC104837.2-201ENST00000427236 424 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 RPS27AP6-201ENST00000427962 448 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AL360081.1-201ENST00000428299 555 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC13P31276 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC13P31276 RPS11P7-201ENST00000442125 465 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 CEACAMP9-201ENST00000442990 513 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AP000797.2-201ENST00000475768 606 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 RPL7P6-201ENST00000480903 738 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC083982.1-201ENST00000485679 344 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 RPS24P16-201ENST00000497294 392 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC13P31276 MTCYBP19-201ENST00000517463 1124 ntBASIC5.54□□□□□ -1.52
HOXC13P31276 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms