Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR4512-201ENST00000583257 77 ntBASIC5.8□□□□□ -1.48
BDNFP23560 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.8□□□□□ -1.48
BDNFP23560 SUMO2P15-201ENST00000604285 278 ntBASIC5.8□□□□□ -1.48
BDNFP23560 AL118556.2-201ENST00000614375 824 ntBASIC5.8□□□□□ -1.48
BDNFP23560 MIR6837-201ENST00000620884 64 ntBASIC5.8□□□□□ -1.48
BDNFP23560 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.8□□□□□ -1.48
BDNFP23560 BMS1P21-201ENST00000634565 365 ntBASIC5.8□□□□□ -1.48
BDNFP23560 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
BDNFP23560 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
BDNFP23560 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.8□□□□□ -1.48
BDNFP23560 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
BDNFP23560 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BDNFP23560 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BDNFP23560 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BDNFP23560 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
BDNFP23560 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
BDNFP23560 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BDNFP23560 BCORP1-203ENST00000513194 5093 ntBASIC5.8□□□□□ -1.48
BDNFP23560 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 RNU2-17P-201ENST00000410290 190 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 AC009506.2-201ENST00000420635 840 ntBASIC5.79□□□□□ -1.48
BDNFP23560 SRSF1P1-201ENST00000424058 520 ntBASIC5.79□□□□□ -1.48
BDNFP23560 RPL7P56-201ENST00000429441 717 ntBASIC5.79□□□□□ -1.48
BDNFP23560 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 AZGP1P2-201ENST00000454506 345 ntBASIC5.79□□□□□ -1.48
BDNFP23560 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 COPS8P2-201ENST00000473228 627 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 RPEP1-201ENST00000504507 658 ntBASIC5.79□□□□□ -1.48
BDNFP23560 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.79□□□□□ -1.48
BDNFP23560 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 NPM1P6-201ENST00000521088 871 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
BDNFP23560 POLR2KP1-201ENST00000553226 168 ntBASIC5.79□□□□□ -1.48
BDNFP23560 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.79□□□□□ -1.48
BDNFP23560 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 ZNF92P3-201ENST00000596594 954 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AC073137.1-201ENST00000605636 634 ntBASIC5.79□□□□□ -1.48
BDNFP23560 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.79□□□□□ -1.48
BDNFP23560 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
BDNFP23560 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
BDNFP23560 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BDNFP23560 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BDNFP23560 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.78□□□□□ -1.48
BDNFP23560 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 AC092162.3-201ENST00000624511 1624 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AL049555.1-201ENST00000562834 1933 ntBASIC5.78□□□□□ -1.48
BDNFP23560 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
BDNFP23560 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 OR9K1P-201ENST00000326513 941 ntBASIC5.78□□□□□ -1.48
BDNFP23560 MIR133B-201ENST00000362210 119 ntBASIC5.78□□□□□ -1.48
BDNFP23560 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BDNFP23560 AL133388.1-201ENST00000404509 287 ntBASIC5.78□□□□□ -1.48
BDNFP23560 MIR1286-201ENST00000408112 78 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AP000534.2-201ENST00000412729 568 ntBASIC5.78□□□□□ -1.48
BDNFP23560 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.78□□□□□ -1.48
BDNFP23560 LINC01881-201ENST00000416103 412 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AL133325.1-201ENST00000421090 382 ntBASIC5.78□□□□□ -1.48
BDNFP23560 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.78□□□□□ -1.48
BDNFP23560 RPL5P2-201ENST00000429598 854 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.78□□□□□ -1.48
BDNFP23560 EEF1A1P1-201ENST00000447052 739 ntBASIC5.78□□□□□ -1.48
BDNFP23560 IGBP1P3-201ENST00000447449 1000 ntBASIC5.78□□□□□ -1.48
BDNFP23560 MTND2P25-201ENST00000449028 610 ntBASIC5.78□□□□□ -1.48
BDNFP23560 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.78□□□□□ -1.48
BDNFP23560 SNORD125-201ENST00000459538 96 ntBASIC5.78□□□□□ -1.48
BDNFP23560 OR52A4P-201ENST00000472867 958 ntBASIC5.78□□□□□ -1.48
BDNFP23560 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.78□□□□□ -1.48
BDNFP23560 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.78□□□□□ -1.48
BDNFP23560 AC024558.1-201ENST00000505008 528 ntBASIC5.78□□□□□ -1.48
BDNFP23560 PGAM1P13-201ENST00000507497 754 ntBASIC5.78□□□□□ -1.48
BDNFP23560 MTND6P2-201ENST00000512226 524 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms