Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR1271-201ENST00000408537 86 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 SETP15-201ENST00000412724 337 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 NPM1P22-201ENST00000427761 952 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 PSMD10P3-201ENST00000437000 448 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.03□□□□□ -1.6
XRCC1P18887 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.03□□□□□ -1.6
XRCC1P18887 RN7SL826P-201ENST00000479724 288 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 RPL5P22-201ENST00000480199 884 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 HMGB3P16-201ENST00000508037 287 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 CCNHP1-201ENST00000513311 678 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AC004980.4-201ENST00000513375 203 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 RN7SKP260-201ENST00000516907 149 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AP000676.2-201ENST00000529711 301 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.03□□□□□ -1.6
XRCC1P18887 BNIP3P1-201ENST00000547295 580 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
XRCC1P18887 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.03□□□□□ -1.6
XRCC1P18887 AC008536.1-201ENST00000602872 669 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AC133644.2-201ENST00000608142 540 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AL451049.1-201ENST00000608672 497 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 AC090510.2-201ENST00000617465 629 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.03□□□□□ -1.6
XRCC1P18887 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XRCC1P18887 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.03□□□□□ -1.6
XRCC1P18887 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRCC1P18887 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.03□□□□□ -1.6
XRCC1P18887 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.03□□□□□ -1.6
XRCC1P18887 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
XRCC1P18887 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XRCC1P18887 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 TTC39DP-201ENST00000416781 1688 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRCC1P18887 ZNF652P1-201ENST00000442420 1309 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.02□□□□□ -1.61
XRCC1P18887 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRCC1P18887 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRCC1P18887 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC131971.1-201ENST00000332881 1482 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 NXF4-202ENST00000416098 1465 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
XRCC1P18887 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
XRCC1P18887 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC013442.1-201ENST00000397347 228 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 AL645733.1-201ENST00000402250 217 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 AL359643.1-201ENST00000404109 423 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.02□□□□□ -1.61
XRCC1P18887 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC096644.3-201ENST00000416788 338 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.02□□□□□ -1.61
XRCC1P18887 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.02□□□□□ -1.61
XRCC1P18887 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC008676.3-201ENST00000521237 435 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.02□□□□□ -1.61
XRCC1P18887 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.02□□□□□ -1.61
XRCC1P18887 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC093799.2-201ENST00000610062 578 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 AC022106.2-201ENST00000620114 757 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.02□□□□□ -1.61
XRCC1P18887 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.02□□□□□ -1.61
XRCC1P18887 AC092111.2-201ENST00000611627 1414 ntBASIC5.02□□□□□ -1.61
XRCC1P18887 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRCC1P18887 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 CDC27P2-201ENST00000425026 1922 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 RNA5SP223-201ENST00000365174 120 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 U3.32-201ENST00000408116 212 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 RN7SKP114-201ENST00000410327 279 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 AL356968.2-201ENST00000412769 1257 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.01□□□□□ -1.61
XRCC1P18887 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.01□□□□□ -1.61
XRCC1P18887 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
XRCC1P18887 RPL35AP21-201ENST00000437667 333 ntBASIC5.01□□□□□ -1.61
XRCC1P18887 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.01□□□□□ -1.61
XRCC1P18887 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms