Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
UBCP0CG48 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
UBCP0CG48 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
UBCP0CG48 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.46□□□□□ -1.7
UBCP0CG48 AL450326.2-201ENST00000421913 1962 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UBCP0CG48 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 SNORA2.3-201ENST00000383920 135 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 NUDT19P3-201ENST00000404698 555 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.46□□□□□ -1.7
UBCP0CG48 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 AC093655.2-201ENST00000425735 631 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 CYCSP6-201ENST00000434498 302 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 MTND6P18-201ENST00000439477 513 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.46□□□□□ -1.7
UBCP0CG48 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 YWHAEP1-201ENST00000453697 763 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 Z92846.1-201ENST00000456203 268 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 RPL35AP19-201ENST00000469425 329 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 AC022336.1-201ENST00000475510 337 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 RPL23AP53-201ENST00000521854 457 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.46□□□□□ -1.7
UBCP0CG48 AL512310.9-201ENST00000553311 948 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.46□□□□□ -1.7
UBCP0CG48 SUGT1P3-202ENST00000604259 383 ntBASIC4.46□□□□□ -1.7
UBCP0CG48 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.46□□□□□ -1.7
UBCP0CG48 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
UBCP0CG48 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
UBCP0CG48 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
UBCP0CG48 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
UBCP0CG48 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.46□□□□□ -1.7
UBCP0CG48 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
UBCP0CG48 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
UBCP0CG48 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.45□□□□□ -1.7
UBCP0CG48 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 MIR365B-201ENST00000362317 111 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RNU1-77P-201ENST00000390868 162 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AL390774.1-201ENST00000411924 246 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RCC2P2-201ENST00000422174 918 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 IPPKP1-201ENST00000422501 768 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RPS4XP16-201ENST00000427198 791 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AC022022.1-201ENST00000430304 178 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AC012075.1-201ENST00000436549 580 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 CYCSP12-201ENST00000437729 300 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RPL7AP61-201ENST00000443410 636 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.45□□□□□ -1.7
UBCP0CG48 RN7SL443P-201ENST00000464331 290 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 NIP7P2-201ENST00000485801 544 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
UBCP0CG48 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.45□□□□□ -1.7
UBCP0CG48 TCP11X3P-202ENST00000514289 1254 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RNA5SP228-201ENST00000516232 133 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 RNU6-941P-201ENST00000516346 108 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.45□□□□□ -1.7
UBCP0CG48 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.45□□□□□ -1.7
UBCP0CG48 OR8X1P-201ENST00000534542 869 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.45□□□□□ -1.7
UBCP0CG48 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 AC104695.2-201ENST00000605056 775 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 AC097505.1-201ENST00000610199 565 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 UGT2B26P-201ENST00000508672 1613 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 AC110792.3-201ENST00000595906 1614 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 DDX18P4-201ENST00000511690 1966 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
UBCP0CG48 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UBCP0CG48 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBCP0CG48 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.45□□□□□ -1.7
UBCP0CG48 AC132825.1-201ENST00000463573 2247 ntBASIC4.45□□□□□ -1.7
UBCP0CG48 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.45□□□□□ -1.7
UBCP0CG48 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms