Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RETP07949 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.22□□□□□ -1.57
RETP07949 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.22□□□□□ -1.57
RETP07949 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.22□□□□□ -1.57
RETP07949 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.22□□□□□ -1.57
RETP07949 SNORD56.6-201ENST00000384569 71 ntBASIC5.22□□□□□ -1.57
RETP07949 GLULP6-201ENST00000399502 913 ntBASIC5.22□□□□□ -1.57
RETP07949 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.22□□□□□ -1.57
RETP07949 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.22□□□□□ -1.57
RETP07949 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.22□□□□□ -1.57
RETP07949 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.22□□□□□ -1.57
RETP07949 CYCSP42-201ENST00000450823 238 ntBASIC5.22□□□□□ -1.57
RETP07949 RPL7AP10-201ENST00000481016 791 ntBASIC5.22□□□□□ -1.57
RETP07949 AC026979.1-201ENST00000492525 396 ntBASIC5.22□□□□□ -1.57
RETP07949 AL049874.2-201ENST00000492636 288 ntBASIC5.22□□□□□ -1.57
RETP07949 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.22□□□□□ -1.57
RETP07949 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
RETP07949 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.22□□□□□ -1.57
RETP07949 AC016559.2-201ENST00000510759 359 ntBASIC5.22□□□□□ -1.57
RETP07949 AC109464.1-201ENST00000511091 819 ntBASIC5.22□□□□□ -1.57
RETP07949 AC012400.1-201ENST00000518452 381 ntBASIC5.22□□□□□ -1.57
RETP07949 AC134698.5-201ENST00000519444 336 ntBASIC5.22□□□□□ -1.57
RETP07949 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.22□□□□□ -1.57
RETP07949 AC091042.1-201ENST00000579213 173 ntBASIC5.22□□□□□ -1.57
RETP07949 AC005252.1-201ENST00000604518 1063 ntBASIC5.22□□□□□ -1.57
RETP07949 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.22□□□□□ -1.57
RETP07949 AC006338.2-201ENST00000616864 791 ntBASIC5.22□□□□□ -1.57
RETP07949 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RETP07949 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
RETP07949 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.22□□□□□ -1.57
RETP07949 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.22□□□□□ -1.57
RETP07949 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETP07949 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.21□□□□□ -1.57
RETP07949 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.21□□□□□ -1.57
RETP07949 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RETP07949 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
RETP07949 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.21□□□□□ -1.57
RETP07949 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RETP07949 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RETP07949 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RETP07949 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
RETP07949 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 AC233289.1-201ENST00000403700 508 ntBASIC5.21□□□□□ -1.58
RETP07949 AP002530.1-201ENST00000405705 684 ntBASIC5.21□□□□□ -1.58
RETP07949 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.21□□□□□ -1.58
RETP07949 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.21□□□□□ -1.58
RETP07949 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.21□□□□□ -1.58
RETP07949 KNOP1P3-201ENST00000446933 426 ntBASIC5.21□□□□□ -1.58
RETP07949 AC090804.1-201ENST00000448870 490 ntBASIC5.21□□□□□ -1.58
RETP07949 AC104634.1-201ENST00000452720 462 ntBASIC5.21□□□□□ -1.58
RETP07949 snoU13.1-201ENST00000459157 104 ntBASIC5.21□□□□□ -1.58
RETP07949 AC006967.1-201ENST00000467608 589 ntBASIC5.21□□□□□ -1.58
RETP07949 AC092754.1-201ENST00000472975 479 ntBASIC5.21□□□□□ -1.58
RETP07949 AL161747.1-201ENST00000480068 358 ntBASIC5.21□□□□□ -1.58
RETP07949 RN7SL423P-201ENST00000486202 304 ntBASIC5.21□□□□□ -1.58
RETP07949 RN7SL244P-201ENST00000493405 297 ntBASIC5.21□□□□□ -1.58
RETP07949 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.21□□□□□ -1.58
RETP07949 AC040958.1-201ENST00000561102 201 ntBASIC5.21□□□□□ -1.58
RETP07949 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.21□□□□□ -1.58
RETP07949 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.21□□□□□ -1.58
RETP07949 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.21□□□□□ -1.58
RETP07949 AL589935.2-201ENST00000616471 1231 ntBASIC5.21□□□□□ -1.58
RETP07949 FRG1EP-201ENST00000634469 770 ntBASIC5.21□□□□□ -1.58
RETP07949 AC135068.12-201ENST00000637370 931 ntBASIC5.21□□□□□ -1.58
RETP07949 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
RETP07949 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RETP07949 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RETP07949 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
RETP07949 AC092747.4-201ENST00000620519 1861 ntBASIC5.21□□□□□ -1.58
RETP07949 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
RETP07949 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RETP07949 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.58
RETP07949 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RETP07949 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms