Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC232271.1-201ENST00000602455 2715 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNU4-4P-201ENST00000364588 130 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 SNORD116-2-201ENST00000384274 95 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 SNORD116-6-201ENST00000384711 96 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 TAS2R15P-201ENST00000390674 928 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 MIR550A3-201ENST00000390735 95 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RN7SKP17-201ENST00000411242 351 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 HYALP1-201ENST00000417674 1279 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 ZNF885P-201ENST00000420174 1098 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AL591719.1-201ENST00000444669 744 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 EXOSC3P1-201ENST00000448649 500 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 snoU13.29-201ENST00000459370 104 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC117522.2-201ENST00000510049 657 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 HMGB1P47-201ENST00000511281 589 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 MTCO3P28-201ENST00000513351 515 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 MIMT1-201ENST00000597105 1050 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AL450336.1-201ENST00000605180 586 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC064807.4-201ENST00000607201 407 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC133644.2-201ENST00000608142 540 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AL157392.4-201ENST00000609756 345 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC245389.2-201ENST00000616023 576 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC242843.1-201ENST00000618702 573 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC017104.5-201ENST00000637647 639 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 AC068137.4-201ENST00000638485 296 ntBASIC6.26□□□□□ -1.41
HLA-DOAP06340 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-DOAP06340 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-DOAP06340 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC140479.2-201ENST00000421567 3130 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC004076.2-201ENST00000620532 3323 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 PANDAR-201ENST00000629595 1506 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 HSPD1P14-201ENST00000432666 1618 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 GVINP1-202ENST00000531871 7271 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 NUDT19P3-201ENST00000404698 555 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR51B3P-201ENST00000412287 913 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 ZNF965P-201ENST00000432501 817 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 NDUFA5P9-201ENST00000472609 340 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 NPM1P17-201ENST00000479221 602 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 RN7SL205P-201ENST00000490174 284 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC069306.1-201ENST00000507006 843 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HLA-DOAP06340 RN7SKP147-201ENST00000517154 244 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 DUXAP3-201ENST00000603616 594 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 OR51C1P-201ENST00000608504 942 ntBASIC6.25□□□□□ -1.41
HLA-DOAP06340 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HLA-DOAP06340 MIR8084-201ENST00000614105 89 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms