Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CASC19-206ENST00000641028 1430 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 AC131971.1-201ENST00000332881 1482 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 NCLP2-201ENST00000416078 1462 ntBASIC4.88□□□□□ -1.63
HLA-DQB2P05538 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-DQB2P05538 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC010266.2-201ENST00000564741 3255 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 RN7SKP149-201ENST00000363008 344 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 ARL4AP5-201ENST00000404372 599 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AL121878.1-201ENST00000418638 859 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 VN1R37P-201ENST00000419096 748 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC004074.1-201ENST00000421810 1063 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC007394.1-201ENST00000421941 531 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC007559.1-201ENST00000428736 355 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 RPL12P3-201ENST00000440080 396 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC063943.1-201ENST00000465434 453 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 ASNSP4-201ENST00000511103 447 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 BUD31P1-201ENST00000521828 359 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 FKBP1BP1-201ENST00000553366 325 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 FAM27B-201ENST00000610601 213 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AC015804.1-201ENST00000622935 435 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 CASC19-222ENST00000641321 1173 ntBASIC4.87□□□□□ -1.63
HLA-DQB2P05538 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-DQB2P05538 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 SNORA74A-201ENST00000364089 198 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 HSPE1P27-201ENST00000430808 296 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 VN1R54P-201ENST00000435210 1049 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 RPL31P44-201ENST00000447680 377 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 RBMY2TP-201ENST00000451162 947 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AL356390.1-201ENST00000455684 397 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 RPS3AP41-201ENST00000462701 778 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC104971.1-201ENST00000495117 578 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC091868.1-201ENST00000508746 304 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AP001922.4-201ENST00000526967 290 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AP001284.1-201ENST00000528393 2118 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC051619.2-201ENST00000559063 397 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 BGLT3-201ENST00000564523 994 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 MIR4436B2-201ENST00000581415 91 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 MIR4436B1-201ENST00000583272 91 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 AL445528.2-201ENST00000620582 470 ntBASIC4.86□□□□□ -1.63
HLA-DQB2P05538 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-DQB2P05538 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-DQB2P05538 OR9K1P-202ENST00000641111 3217 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 STX3-208ENST00000641815 3236 ntBASIC4.85□□□□□ -1.63
HLA-DQB2P05538 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms