Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.23□□□□□ -1.73
CD74P04233 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
CD74P04233 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD74P04233 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.23□□□□□ -1.73
CD74P04233 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 DDX18P3-201ENST00000404856 2007 ntBASIC4.22□□□□□ -1.73
CD74P04233 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 RNU1-94P-201ENST00000362627 173 ntBASIC4.22□□□□□ -1.73
CD74P04233 RNA5SP335-201ENST00000363817 110 ntBASIC4.22□□□□□ -1.73
CD74P04233 AL589994.1-201ENST00000404962 340 ntBASIC4.22□□□□□ -1.73
CD74P04233 AL512430.2-201ENST00000406786 339 ntBASIC4.22□□□□□ -1.73
CD74P04233 U3.35-201ENST00000408405 208 ntBASIC4.22□□□□□ -1.73
CD74P04233 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
CD74P04233 RPL34P3-201ENST00000421454 338 ntBASIC4.22□□□□□ -1.73
CD74P04233 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 EI24P4-201ENST00000423683 1078 ntBASIC4.22□□□□□ -1.73
CD74P04233 RPS4XP16-201ENST00000427198 791 ntBASIC4.22□□□□□ -1.73
CD74P04233 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 RPS29P9-201ENST00000440360 171 ntBASIC4.22□□□□□ -1.73
CD74P04233 AL391987.1-201ENST00000441025 200 ntBASIC4.22□□□□□ -1.73
CD74P04233 EEF1B2P6-201ENST00000445713 673 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 OTX2P1-201ENST00000450956 354 ntBASIC4.22□□□□□ -1.73
CD74P04233 EIF2S2P5-201ENST00000457635 968 ntBASIC4.22□□□□□ -1.73
CD74P04233 PPIAP19-201ENST00000486414 492 ntBASIC4.22□□□□□ -1.73
CD74P04233 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 PSMA2P2-201ENST00000504319 686 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC138866.2-201ENST00000508650 584 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 CYCSP22-201ENST00000517555 339 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC022826.1-201ENST00000519383 805 ntBASIC4.22□□□□□ -1.73
CD74P04233 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 AC022882.1-201ENST00000532142 501 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 AC079600.1-201ENST00000550326 297 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.22□□□□□ -1.73
CD74P04233 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.22□□□□□ -1.73
CD74P04233 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 AC011445.2-201ENST00000599274 173 ntBASIC4.22□□□□□ -1.73
CD74P04233 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 AC104687.2-201ENST00000604442 342 ntBASIC4.22□□□□□ -1.73
CD74P04233 AC140113.4-201ENST00000622087 222 ntBASIC4.22□□□□□ -1.73
CD74P04233 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.22□□□□□ -1.73
CD74P04233 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CD74P04233 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.22□□□□□ -1.73
CD74P04233 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD74P04233 MAPK10-320ENST00000641462 6696 ntBASIC4.22□□□□□ -1.73
CD74P04233 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CD74P04233 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.73
CD74P04233 AC009643.2-201ENST00000603543 1448 ntBASIC4.21□□□□□ -1.73
CD74P04233 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 LINC01355-201ENST00000566551 5444 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC093535.2-201ENST00000624769 2326 ntBASIC4.21□□□□□ -1.74
CD74P04233 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CD74P04233 OR52B3P-201ENST00000314715 928 ntBASIC4.21□□□□□ -1.74
CD74P04233 RN7SKP104-201ENST00000362605 328 ntBASIC4.21□□□□□ -1.74
CD74P04233 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.21□□□□□ -1.74
CD74P04233 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD74P04233 MIR1182-201ENST00000408363 97 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 OR6E1P-201ENST00000414424 923 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.21□□□□□ -1.74
CD74P04233 RGS17P1-201ENST00000423358 553 ntBASIC4.21□□□□□ -1.74
CD74P04233 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 AC092162.1-201ENST00000432828 434 ntBASIC4.21□□□□□ -1.74
CD74P04233 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.21□□□□□ -1.74
CD74P04233 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.21□□□□□ -1.74
CD74P04233 AC073052.1-201ENST00000440417 714 ntBASIC4.21□□□□□ -1.74
CD74P04233 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.21□□□□□ -1.74
CD74P04233 RPL31P15-201ENST00000449770 338 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms