Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090510.2-201ENST00000617465 629 ntBASIC5.23□□□□□ -1.57
APOEP02649 AC091905.4-201ENST00000623432 202 ntBASIC5.23□□□□□ -1.57
APOEP02649 AC016542.2-201ENST00000624201 619 ntBASIC5.23□□□□□ -1.57
APOEP02649 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.23□□□□□ -1.57
APOEP02649 NR1H5P-201ENST00000452683 1377 ntBASIC5.23□□□□□ -1.57
APOEP02649 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.23□□□□□ -1.57
APOEP02649 AL731532.2-201ENST00000623542 1953 ntBASIC5.23□□□□□ -1.57
APOEP02649 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.23□□□□□ -1.57
APOEP02649 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 AC007996.1-201ENST00000620414 2821 ntBASIC5.22□□□□□ -1.57
APOEP02649 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
APOEP02649 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 MAPK10-349ENST00000641767 3661 ntBASIC5.22□□□□□ -1.57
APOEP02649 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 RNA5SP428-201ENST00000365129 132 ntBASIC5.22□□□□□ -1.57
APOEP02649 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 SNORA70.10-201ENST00000384515 134 ntBASIC5.22□□□□□ -1.57
APOEP02649 AL021331.1-201ENST00000402817 582 ntBASIC5.22□□□□□ -1.57
APOEP02649 AP002530.1-201ENST00000405705 684 ntBASIC5.22□□□□□ -1.57
APOEP02649 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 RPS29P9-201ENST00000440360 171 ntBASIC5.22□□□□□ -1.57
APOEP02649 GTF3AP5-201ENST00000442645 697 ntBASIC5.22□□□□□ -1.57
APOEP02649 RPL7AP61-201ENST00000443410 636 ntBASIC5.22□□□□□ -1.57
APOEP02649 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 TCEA1P1-201ENST00000449716 880 ntBASIC5.22□□□□□ -1.57
APOEP02649 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.22□□□□□ -1.57
APOEP02649 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 RPL21P6-201ENST00000479171 504 ntBASIC5.22□□□□□ -1.57
APOEP02649 RPL37AP8-201ENST00000494116 276 ntBASIC5.22□□□□□ -1.57
APOEP02649 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.22□□□□□ -1.57
APOEP02649 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 AC105031.1-201ENST00000518550 476 ntBASIC5.22□□□□□ -1.57
APOEP02649 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.22□□□□□ -1.57
APOEP02649 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.22□□□□□ -1.57
APOEP02649 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.22□□□□□ -1.57
APOEP02649 AL353662.3-201ENST00000625131 237 ntBASIC5.22□□□□□ -1.57
APOEP02649 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
APOEP02649 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.57
APOEP02649 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
APOEP02649 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.21□□□□□ -1.57
APOEP02649 AC131971.1-201ENST00000332881 1482 ntBASIC5.21□□□□□ -1.58
APOEP02649 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.21□□□□□ -1.58
APOEP02649 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.21□□□□□ -1.58
APOEP02649 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
APOEP02649 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 BMS1P3-201ENST00000372011 932 ntBASIC5.21□□□□□ -1.58
APOEP02649 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 AC007394.1-201ENST00000421941 531 ntBASIC5.21□□□□□ -1.58
APOEP02649 AC006455.6-201ENST00000426192 893 ntBASIC5.21□□□□□ -1.58
APOEP02649 RPL34P6-201ENST00000432390 345 ntBASIC5.21□□□□□ -1.58
APOEP02649 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.21□□□□□ -1.58
APOEP02649 RHOT1P3-201ENST00000436571 331 ntBASIC5.21□□□□□ -1.58
APOEP02649 RPL35AP21-201ENST00000437667 333 ntBASIC5.21□□□□□ -1.58
APOEP02649 PRPF38AP2-201ENST00000438179 851 ntBASIC5.21□□□□□ -1.58
APOEP02649 TXNP5-201ENST00000441043 315 ntBASIC5.21□□□□□ -1.58
APOEP02649 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
APOEP02649 RN7SL319P-201ENST00000480656 221 ntBASIC5.21□□□□□ -1.58
APOEP02649 AC093270.2-201ENST00000486157 792 ntBASIC5.21□□□□□ -1.58
APOEP02649 AC140172.1-201ENST00000502928 141 ntBASIC5.21□□□□□ -1.58
APOEP02649 AL512310.9-201ENST00000553311 948 ntBASIC5.21□□□□□ -1.58
APOEP02649 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.21□□□□□ -1.58
APOEP02649 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.21□□□□□ -1.58
APOEP02649 MEMO1P5-201ENST00000604810 406 ntBASIC5.21□□□□□ -1.58
APOEP02649 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
APOEP02649 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.21□□□□□ -1.58
APOEP02649 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
APOEP02649 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
APOEP02649 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
APOEP02649 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 AC112255.1-201ENST00000624070 2493 ntBASIC5.2□□□□□ -1.58
APOEP02649 MTCO1P15-201ENST00000529569 1526 ntBASIC5.2□□□□□ -1.58
APOEP02649 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
APOEP02649 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
APOEP02649 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
APOEP02649 RPL10P10-201ENST00000403509 664 ntBASIC5.2□□□□□ -1.58
APOEP02649 AL136116.2-201ENST00000404020 785 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms