Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC010300.1-201ENST00000600671 5134 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SPTA1P02549 SNORA70H-201ENST00000383910 135 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 SNORA70J-201ENST00000384182 135 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL607077.1-201ENST00000401718 499 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL357515.1-201ENST00000402967 542 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 AC073410.1-201ENST00000435125 589 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AC010350.1-201ENST00000504908 231 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 RN7SKP276-201ENST00000516242 268 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.54□□□□□ -1.68
SPTA1P02549 OR11H3P-201ENST00000554547 982 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.54□□□□□ -1.68
SPTA1P02549 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 AC135068.5-201ENST00000624197 983 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 OR4K17-201ENST00000315543 1032 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 RNA5SP90-201ENST00000364801 99 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 RN7SKP114-201ENST00000410327 279 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 TXNP5-201ENST00000441043 315 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL356390.1-201ENST00000455684 397 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 RPL7P15-201ENST00000461190 712 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.54□□□□□ -1.68
SPTA1P02549 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.54□□□□□ -1.68
SPTA1P02549 AP001885.1-201ENST00000621658 558 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 AL365361.1-201ENST00000566942 3481 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 UGT2B24P-201ENST00000514441 1597 ntBASIC4.54□□□□□ -1.68
SPTA1P02549 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 MAK-202ENST00000354489 3941 ntTSL 5 BASIC4.54□□□□□ -1.68
SPTA1P02549 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPTA1P02549 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SPTA1P02549 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.53□□□□□ -1.68
SPTA1P02549 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 AC079097.1-201ENST00000512187 1399 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SPTA1P02549 RNF10P1-201ENST00000418589 369 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.53□□□□□ -1.68
SPTA1P02549 RPEP3-201ENST00000425462 676 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 RPL23AP56-201ENST00000460778 453 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 RPL23AP2-201ENST00000471227 466 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.53□□□□□ -1.68
SPTA1P02549 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.53□□□□□ -1.68
SPTA1P02549 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.53□□□□□ -1.68
SPTA1P02549 AC010928.1-201ENST00000592477 1447 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.53□□□□□ -1.68
SPTA1P02549 OR4C10P-201ENST00000434991 931 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 IGHV5-78-201ENST00000450948 295 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.53□□□□□ -1.68
SPTA1P02549 OR52A4P-201ENST00000472867 958 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 OR5D2P-201ENST00000524390 911 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.53□□□□□ -1.68
SPTA1P02549 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.53□□□□□ -1.68
SPTA1P02549 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 MIR3944-201ENST00000581277 108 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 RN7SL435P-201ENST00000584418 282 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.53□□□□□ -1.68
SPTA1P02549 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SPTA1P02549 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPTA1P02549 OR52B5P-204ENST00000641744 3467 ntBASIC4.53□□□□□ -1.68
SPTA1P02549 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.53□□□□□ -1.68
SPTA1P02549 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.52□□□□□ -1.69
SPTA1P02549 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.52□□□□□ -1.69
SPTA1P02549 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.52□□□□□ -1.69
SPTA1P02549 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC4.52□□□□□ -1.69
SPTA1P02549 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.52□□□□□ -1.69
SPTA1P02549 AC025164.1-201ENST00000496249 478 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 ENPP7P9-201ENST00000514456 627 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.52□□□□□ -1.69
SPTA1P02549 AL121873.1-201ENST00000616013 524 ntBASIC4.52□□□□□ -1.69
SPTA1P02549 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
SPTA1P02549 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.52□□□□□ -1.69
SPTA1P02549 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SPTA1P02549 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms