Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 RNA5SP507-201ENST00000363603 121 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 RNU4-40P-201ENST00000364351 143 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 RNA5SP131-201ENST00000365452 119 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 GAPDHP42-201ENST00000406848 981 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.75□□□□□ -1.65
LMX1BO60663 AC096644.3-201ENST00000416788 338 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 ARL2BPP3-201ENST00000421226 480 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 NPM1P26-201ENST00000426339 738 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 AL096829.2-201ENST00000446582 742 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 VDAC2P4-201ENST00000452925 711 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 DUXAP8-207ENST00000456786 622 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 RN7SL172P-201ENST00000460535 303 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 PSAT1P4-201ENST00000466500 526 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 RN7SL329P-201ENST00000467740 299 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 RN7SL51P-201ENST00000468230 285 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 RN7SL826P-201ENST00000479724 288 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC090543.1-201ENST00000492168 485 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.75□□□□□ -1.65
LMX1BO60663 SCARNA20.4-201ENST00000516969 131 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 SEC11B-201ENST00000518383 499 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 AC034205.1-201ENST00000520621 638 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 AP001636.2-201ENST00000525517 696 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AP003066.2-201ENST00000529375 555 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.75□□□□□ -1.65
LMX1BO60663 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 H3F3BP2-201ENST00000583907 357 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.75□□□□□ -1.65
LMX1BO60663 SUGT1P3-202ENST00000604259 383 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 Z99289.3-201ENST00000605586 594 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AL451064.1-201ENST00000607718 471 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC087683.2-201ENST00000611384 326 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 DUXAP10-204ENST00000612052 616 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AL121612.2-201ENST00000612261 482 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AL359513.1-201ENST00000614364 557 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 AC019226.2-201ENST00000625973 424 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 SAMMSON-209ENST00000641222 1100 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 GVINP1-202ENST00000531871 7271 ntBASIC4.75□□□□□ -1.65
LMX1BO60663 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
LMX1BO60663 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LMX1BO60663 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 RNA5SP241-201ENST00000391326 114 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 AL133173.1-201ENST00000423458 397 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 AL139148.1-201ENST00000427122 680 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 AL009048.1-201ENST00000450437 298 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 MTCO2P6-201ENST00000463134 685 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 LARP7P4-201ENST00000481075 878 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 RN7SL727P-201ENST00000482164 296 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 UBA52P7-201ENST00000486088 380 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 EIF1P7-201ENST00000487533 337 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.74□□□□□ -1.65
LMX1BO60663 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.74□□□□□ -1.65
LMX1BO60663 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.74□□□□□ -1.65
LMX1BO60663 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.74□□□□□ -1.65
LMX1BO60663 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 AC233266.2-201ENST00000567067 528 ntBASIC4.74□□□□□ -1.65
LMX1BO60663 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LMX1BO60663 MIR7853-201ENST00000584820 132 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms