Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AP001033.2-201ENST00000609701 1003 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC068726.1-201ENST00000610993 341 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC117503.3-201ENST00000623811 601 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 MTND5P11-201ENST00000511037 1812 ntBASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGB1P1B2RPK0 AC022031.1-201ENST00000585985 2593 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC100778.3-201ENST00000580060 1750 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RNA5SP77-201ENST00000365394 120 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CDY14P-201ENST00000431260 1014 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CDY12P-201ENST00000440679 1015 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RNFT1P2-201ENST00000443064 757 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CDY13P-201ENST00000445813 1015 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC068135.1-201ENST00000446164 246 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CDY23P-201ENST00000451661 1014 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 TPT1P1-201ENST00000458495 518 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RPL12P30-201ENST00000488389 499 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RPL37AP8-201ENST00000494116 276 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC008565.1-201ENST00000509046 885 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RNU2-30P-201ENST00000516209 141 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RN7SKP82-201ENST00000516786 223 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC024940.3-201ENST00000538551 316 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL353807.4-201ENST00000604995 257 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL392112.1-201ENST00000605115 829 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 RPSAP75-201ENST00000605848 301 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL021368.1-201ENST00000607490 540 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL512652.1-201ENST00000619006 500 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC103564.3-201ENST00000621194 220 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL731566.1-201ENST00000620490 1937 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 DCAF13P3-201ENST00000561147 1334 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AC104446.1-201ENST00000613728 1321 ntBASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGB1P1B2RPK0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AL139811.1-201ENST00000424779 2299 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RNU6-650P-201ENST00000365658 111 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RN7SKP117-201ENST00000410175 264 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RNA5SP487-201ENST00000410186 122 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RN7SKP177-201ENST00000410567 355 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AC004448.2-201ENST00000422360 586 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 RPS26P40-201ENST00000435209 294 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 TUBB4BP6-201ENST00000437576 479 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AMYP1-201ENST00000440059 1023 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AC092601.1-201ENST00000444526 383 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 CYCSP24-201ENST00000445119 316 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AC009244.1-201ENST00000450566 258 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 AL358876.1-201ENST00000453364 1075 ntBASIC5.62□□□□□ -1.51
HMGB1P1B2RPK0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms