Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SRRM4A7MD48 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.32□□□□□ -1.72
SRRM4A7MD48 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRRM4A7MD48 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRRM4A7MD48 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 METTL21EP-201ENST00000298105 713 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 RNU1-19P-201ENST00000363306 165 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 RNU6-244P-201ENST00000391028 104 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 SNORA48.4-201ENST00000391089 134 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 OR4K12P-201ENST00000406538 961 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 Z93019.1-201ENST00000416450 973 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 MTCYBP21-201ENST00000443300 1113 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC099063.2-201ENST00000446360 662 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 HMGN1P36-201ENST00000446623 298 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC105399.1-202ENST00000447303 205 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL049829.1-201ENST00000465411 156 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 RPS12P31-201ENST00000491419 398 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC093890.1-201ENST00000502554 540 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC016559.2-201ENST00000510759 359 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC108471.1-201ENST00000513977 287 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 BUD31P1-201ENST00000521828 359 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC112191.2-201ENST00000522428 333 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 MIR548Y-201ENST00000582739 110 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL137072.1-201ENST00000603444 466 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC005034.4-201ENST00000603612 899 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 FO393422.1-201ENST00000603908 708 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC009027.1-201ENST00000604510 479 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL158211.2-201ENST00000607282 395 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC000068.2-201ENST00000608816 460 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 RN7SL787P-201ENST00000613000 284 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL122125.1-201ENST00000616999 600 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC109583.2-201ENST00000617367 129 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AP002967.1-201ENST00000624203 539 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRRM4A7MD48 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC107027.3-201ENST00000565095 3473 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC093311.1-201ENST00000506586 2021 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.31□□□□□ -1.72
SRRM4A7MD48 AC009229.4-201ENST00000623854 1947 ntBASIC4.31□□□□□ -1.72
SRRM4A7MD48 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SRRM4A7MD48 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SRRM4A7MD48 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SRRM4A7MD48 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SRRM4A7MD48 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
SRRM4A7MD48 AC010266.2-201ENST00000564741 3255 ntBASIC4.3□□□□□ -1.72
SRRM4A7MD48 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms