Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL355480.1-201ENST00000629041 99 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TRAPPC4Q9Y296 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 Z95327.2-201ENST00000414579 1873 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 IL6STP1-201ENST00000346911 1020 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AP000580.1-201ENST00000404439 358 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 U3.36-201ENST00000408418 213 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC002524.1-201ENST00000411687 547 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC013429.2-201ENST00000418798 781 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 DDX39BP1-205ENST00000422507 192 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AL139148.1-201ENST00000427122 680 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC005033.1-201ENST00000428904 813 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 RPL5P16-201ENST00000471467 790 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 RN7SL222P-201ENST00000476452 299 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC020779.1-201ENST00000478757 796 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ENPP7P9-201ENST00000514456 627 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AL671862.1-201ENST00000515851 349 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 RN7SKP260-201ENST00000516907 149 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 IGLV2-28-201ENST00000520681 304 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC011270.1-201ENST00000558606 583 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC115989.2-201ENST00000578640 563 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 RN7SL176P-201ENST00000580352 264 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC233280.2-201ENST00000603917 1070 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC087283.1-201ENST00000604029 1074 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 BNIP3P35-201ENST00000604530 490 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 RPSAP73-201ENST00000614820 330 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 SALL4P2-201ENST00000423288 2910 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AC120338.1-201ENST00000625074 1541 ntBASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRAPPC4Q9Y296 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC083843.2-201ENST00000568248 6253 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MIR323B-201ENST00000385269 82 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 U3.32-201ENST00000408116 212 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 GTF3AP1-201ENST00000416942 1004 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC234781.4-201ENST00000419384 244 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 NFYAP1-201ENST00000431953 972 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 OR6C71P-201ENST00000432580 913 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MTND6P5-201ENST00000448266 512 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 RNU7-157P-201ENST00000459600 66 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 RPL21P6-201ENST00000479171 504 ntBASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRAPPC4Q9Y296 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms