Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 RPL31P53-201ENST00000457065 348 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC245028.2-201ENST00000458673 253 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 RN7SL610P-201ENST00000463845 291 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC105918.1-201ENST00000474399 838 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 ENPP7P11-201ENST00000505915 627 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 BTF3P13-201ENST00000513224 490 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 RNA5SP392-201ENST00000516905 112 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 GCSHP4-201ENST00000538792 439 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC008033.2-201ENST00000542626 177 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AP000619.2-201ENST00000546014 969 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC116553.2-201ENST00000564203 463 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 MIR4436B2-201ENST00000581415 91 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 MIR4436B1-201ENST00000583272 91 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AP002884.5-201ENST00000595053 1132 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC020915.5-201ENST00000596836 964 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC125494.2-201ENST00000602431 657 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 BNIP3P7-201ENST00000605641 516 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC008833.1-201ENST00000611633 691 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AL353662.3-201ENST00000625131 237 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 OR10AB1P-202ENST00000641219 1686 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC002525.1-201ENST00000624392 1622 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 IRF5P1-201ENST00000504852 2164 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 ECM1P2-201ENST00000503354 1577 ntBASIC5.04□□□□□ -1.6
LHX3Q9UBR4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LHX3Q9UBR4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AL021331.1-201ENST00000402817 582 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AJ239321.1-201ENST00000424255 564 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC022336.1-201ENST00000475510 337 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC012123.2-201ENST00000485809 248 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC125612.1-201ENST00000547580 377 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 DUX4L52-201ENST00000549363 777 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC006349.1-201ENST00000555526 235 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC024940.4-201ENST00000605507 246 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AL158062.1-201ENST00000619632 745 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AL445528.2-201ENST00000620582 470 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 AC011447.7-201ENST00000624228 1590 ntBASIC5.03□□□□□ -1.6
LHX3Q9UBR4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX3Q9UBR4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX3Q9UBR4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms