Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ADAM5-202ENST00000399789 1942 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC092681.1-201ENST00000297369 291 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 CBX1P3-201ENST00000413296 527 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AL590762.3-201ENST00000436372 640 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC104634.1-201ENST00000452720 462 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 HIGD1AP8-201ENST00000453927 274 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 Z92846.1-201ENST00000456203 268 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 MTND2P30-201ENST00000456663 382 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 RN7SKP147-201ENST00000517154 244 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC092709.1-201ENST00000521355 1045 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 MIMT1-201ENST00000597105 1050 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC003985.2-201ENST00000562268 1669 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AC093591.2-201ENST00000565254 3843 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 AP001002.1-201ENST00000625148 1513 ntBASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC6Q9UBN7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 MIR105-1-201ENST00000385222 81 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 RPA2P2-201ENST00000419698 796 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 FABP7P2-201ENST00000429946 379 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 MTCO1P45-201ENST00000431457 267 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC092647.2-201ENST00000452998 253 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AK4P6-201ENST00000505168 528 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC021106.1-201ENST00000509020 1058 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 RNA5SP230-201ENST00000517039 122 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC009852.2-201ENST00000567898 485 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC122134.1-202ENST00000569111 1201 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC011447.4-201ENST00000587562 111 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC006272.2-201ENST00000594725 163 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 HMGB1P51-201ENST00000605166 638 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AL158211.2-201ENST00000607282 395 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC073342.3-201ENST00000624211 193 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 AC073869.8-201ENST00000641806 335 ntBASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HDAC6Q9UBN7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HDAC6Q9UBN7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HDAC6Q9UBN7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms