Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRFN1Q9P244 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRFN1Q9P244 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.42□□□□□ -1.54
LRFN1Q9P244 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRFN1Q9P244 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRFN1Q9P244 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRFN1Q9P244 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 THAP12P9-201ENST00000503971 2360 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 RNU6-353P-201ENST00000364266 108 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 RNA5SP500-201ENST00000364486 119 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 U3.23-201ENST00000391132 200 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC002524.1-201ENST00000411687 547 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC099336.2-201ENST00000422457 254 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC092634.2-201ENST00000428146 1010 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 CLUHP1-201ENST00000435012 1190 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 Z80107.1-201ENST00000436830 412 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 PTGES3P1-201ENST00000439531 483 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 ELOCP10-201ENST00000440624 327 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 MRPL35P2-201ENST00000448009 511 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 DNAJC19P8-201ENST00000452887 259 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC099560.2-201ENST00000457554 255 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 RPS27AP2-201ENST00000457576 465 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 NENFP3-201ENST00000503735 313 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC008837.1-201ENST00000511513 412 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 TMEM97P2-201ENST00000517841 403 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 IGKV2-36-201ENST00000519999 223 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 NDUFS5P6-201ENST00000529136 295 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 TXNP4-201ENST00000575018 310 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 ELOCP34-201ENST00000604436 327 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 BNIP3P4-201ENST00000604946 565 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC024060.1-201ENST00000607052 494 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC022467.1-201ENST00000614738 749 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC016717.3-201ENST00000624730 554 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 BX649567.1-201ENST00000642071 1134 ntBASIC5.41□□□□□ -1.54
LRFN1Q9P244 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.41□□□□□ -1.54
LRFN1Q9P244 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 AC005332.5-201ENST00000591222 2919 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LRFN1Q9P244 RNA5SP211-201ENST00000365516 117 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 MCTS2P-201ENST00000394552 546 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 RNU2-6P-201ENST00000411404 190 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 TMA16P2-201ENST00000413187 601 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 OR2AT2P-201ENST00000413438 905 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 RPL34P3-201ENST00000421454 338 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 OSTCP5-201ENST00000425293 453 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LRFN1Q9P244 DEFA9P-201ENST00000433042 285 ntBASIC5.4□□□□□ -1.54
LRFN1Q9P244 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms