Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RGS17P1-201ENST00000423358 553 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 EIF4HP2-201ENST00000424380 563 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 RPL7P11-201ENST00000437586 658 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL591363.1-201ENST00000450091 483 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 RN7SL319P-201ENST00000480656 221 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC090142.2-201ENST00000483263 416 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC020890.1-201ENST00000491837 504 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 RPL37AP8-201ENST00000494116 276 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 RPS27AP18-201ENST00000515536 459 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 OR8A2P-201ENST00000528631 952 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 DPRXP4-201ENST00000578053 568 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC010424.2-201ENST00000607594 443 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 MIR6826-201ENST00000617808 98 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL022401.1-201ENST00000619498 108 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC019206.1-201ENST00000621938 425 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AC243960.7-201ENST00000623532 707 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL353662.3-201ENST00000625131 237 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 DDX18P5-201ENST00000534547 1306 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 AL034370.1-201ENST00000397254 1590 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 CASC19-281ENST00000642118 1554 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 BTBD10P1-201ENST00000549824 1352 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TREX1Q9NSU2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC112255.1-201ENST00000624070 2493 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 CR382285.2-201ENST00000624662 1495 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 MIR765-201ENST00000390226 114 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 U3.35-201ENST00000408405 208 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 RN7SKP229-201ENST00000410465 302 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 NPM1P40-201ENST00000412758 733 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 GTF2IP5-201ENST00000414608 731 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC013268.2-201ENST00000420753 337 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC093414.1-201ENST00000434712 514 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 SNRPFP2-201ENST00000440710 251 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC109462.1-201ENST00000491087 368 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC013701.1-201ENST00000522657 465 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 HAUS8P1-201ENST00000549005 542 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 AC006453.5-201ENST00000636451 619 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 SMG1P6-201ENST00000532337 2930 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.89□□□□□ -1.63
TREX1Q9NSU2 CASC19-206ENST00000641028 1430 ntBASIC4.89□□□□□ -1.63
TREX1Q9NSU2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AL021331.1-201ENST00000402817 582 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC233289.1-201ENST00000403700 508 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AP002530.1-201ENST00000405705 684 ntBASIC4.88□□□□□ -1.63
TREX1Q9NSU2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.88□□□□□ -1.63
TREX1Q9NSU2 RPL23AP56-201ENST00000460778 453 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms