Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 PTGES3P2-201ENST00000407942 482 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC211486.3-201ENST00000412694 621 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 VN1R31P-201ENST00000417498 730 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC073464.3-201ENST00000422564 712 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC073508.1-201ENST00000428866 656 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 RPL12P18-201ENST00000437175 325 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 RPL7P39-201ENST00000481157 744 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC090543.1-201ENST00000492168 485 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AL049779.2-201ENST00000553847 315 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 DNAJC19P3-201ENST00000594491 331 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 BNIP3P27-201ENST00000599991 412 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 IMMP1LP3-201ENST00000604197 224 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AL450270.1-201ENST00000606160 391 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC109309.2-201ENST00000612597 332 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AL136520.1-201ENST00000600311 1322 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC133552.1-201ENST00000569988 4007 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC092111.2-201ENST00000611627 1414 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC019072.1-201ENST00000604535 1551 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 SNORA51.1-201ENST00000363243 140 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 SNORA67-201ENST00000384423 137 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AL390316.1-201ENST00000406279 553 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 TRIM60P17-201ENST00000415181 719 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RAB9AP4-201ENST00000415230 609 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 ARAFP2-201ENST00000440565 559 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RPL31P20-201ENST00000449593 360 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AP002345.1-201ENST00000456493 928 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 EIF2S2P4-201ENST00000461070 984 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RPL7P6-201ENST00000480903 738 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC016550.1-201ENST00000505348 785 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 PGAM1P13-201ENST00000507497 754 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 HMGB1P47-201ENST00000511281 589 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 HMGN1P15-201ENST00000513870 295 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RNA5SP373-201ENST00000517271 95 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AP006245.2-201ENST00000522004 300 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 OR51C1P-201ENST00000608504 942 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AL122125.1-201ENST00000616999 600 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC074140.1-201ENST00000621617 208 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 CYP4F35P-202ENST00000636121 390 ntBASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PCDH9Q9HC56 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms