Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC013410.1-201ENST00000436223 1232 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 RPS11P7-201ENST00000442125 465 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC073850.1-201ENST00000449243 255 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC091685.2-201ENST00000454924 864 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC109462.1-201ENST00000491087 368 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC119751.5-201ENST00000514077 770 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC091515.1-201ENST00000548110 679 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 LSM3P2-201ENST00000551246 273 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MIR4646-201ENST00000580775 63 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MIR4436B2-201ENST00000581415 91 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MIR4436B1-201ENST00000583272 91 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC133794.1-201ENST00000602731 914 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 LSM1P2-201ENST00000604911 322 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC087683.2-201ENST00000611384 326 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC019226.2-201ENST00000625973 424 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.58□□□□□ -1.52
EBF3Q9H4W6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.58□□□□□ -1.52
EBF3Q9H4W6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AL050305.1-201ENST00000399993 1230 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC009784.1-201ENST00000426484 460 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 RPL7P6-201ENST00000480903 738 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC027338.1-201ENST00000514840 825 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 GAPDHP62-201ENST00000515313 990 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 RN7SKP66-201ENST00000516681 231 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 MTND2P32-201ENST00000521584 1038 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 NMNAT1P5-201ENST00000559657 841 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC106785.3-201ENST00000564064 847 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 MTCYBP28-201ENST00000566728 1132 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 OR1F2P-201ENST00000570470 933 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AP002799.1-201ENST00000623552 423 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 LINC01739-205ENST00000641890 573 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC012321.1-201ENST00000561622 1588 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 AC114947.2-201ENST00000565748 2125 ntBASIC5.57□□□□□ -1.52
EBF3Q9H4W6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
EBF3Q9H4W6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC073136.1-201ENST00000449426 2884 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AL035405.1-201ENST00000400795 710 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 RNA5SP487-201ENST00000410186 122 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC093162.1-201ENST00000419682 124 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AC023141.6-201ENST00000429418 337 ntBASIC5.56□□□□□ -1.52
EBF3Q9H4W6 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.56□□□□□ -1.52
EBF3Q9H4W6 VN1R54P-201ENST00000435210 1049 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms