Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC073592.6-201ENST00000624271 415 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC125238.2-201ENST00000430003 1440 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 SNORD35A-201ENST00000363389 86 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RNU6-560P-201ENST00000364007 108 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPL23AP59-201ENST00000399415 461 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 DEFB108C-201ENST00000400154 252 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 HSPD1P16-201ENST00000402302 394 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 VIM2P-201ENST00000402383 1294 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 ZNF603P-201ENST00000405613 487 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC015977.1-201ENST00000418887 292 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC009784.1-201ENST00000426484 460 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RBMX2P4-201ENST00000441256 376 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPL7P1-201ENST00000468161 747 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPL7P9-201ENST00000468715 747 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 GAPDHP36-201ENST00000480688 918 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPL9P33-201ENST00000484311 566 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC107398.1-201ENST00000486904 505 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC113430.1-201ENST00000506872 718 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 MAST4-IT1-201ENST00000514241 658 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RNA5SP400-201ENST00000517155 111 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC005363.1-201ENST00000530779 351 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 CYP2C60P-201ENST00000566088 139 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC011260.1-201ENST00000578420 472 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 RN7SL230P-201ENST00000580835 303 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC134669.1-201ENST00000581275 672 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 MIR4433B-201ENST00000581329 102 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 GLYATL1P2-202ENST00000588046 902 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC018618.2-201ENST00000604770 446 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC017083.3-201ENST00000609955 700 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 MIR6778-201ENST00000617912 73 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC008443.7-201ENST00000622195 246 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC024595.1-201ENST00000623088 387 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL356266.1-201ENST00000623311 483 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AP000550.3-201ENST00000637734 379 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 AC096921.2-201ENST00000561507 1916 ntBASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.5□□□□□ -1.37
FOXP3Q9BZS1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 GUCY1B2-204ENST00000531898 1979 ntBASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 RNA5SP27-201ENST00000363839 119 ntBASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXP3Q9BZS1 U3.52-201ENST00000384034 216 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms