Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 COX6B1P5-201ENST00000509843 249 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 RNU6-513P-201ENST00000516104 104 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC068993.1-201ENST00000546724 589 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC087477.6-201ENST00000559595 843 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC093249.4-201ENST00000564755 259 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 MIR4472-2-201ENST00000582069 67 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 EIF1P5-201ENST00000585002 234 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 RNF138P2-201ENST00000603490 592 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 AC015804.1-201ENST00000622935 435 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RSPO3Q9BXY4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RPL23P2-201ENST00000320371 421 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RNA5SP455-201ENST00000365190 119 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 MIR1271-201ENST00000408537 86 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RPL23AP27-201ENST00000415161 451 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 DDX39BP1-205ENST00000422507 192 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 NIPA2P1-201ENST00000426223 976 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 H2AFZP6-201ENST00000444403 394 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AL445433.1-201ENST00000457507 257 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RN7SL172P-201ENST00000460535 303 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RPS4XP12-201ENST00000461747 709 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC020890.1-201ENST00000491837 504 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 RNA5SP464-201ENST00000516251 108 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 FKBP1BP1-201ENST00000553366 325 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 MIR8069-1-201ENST00000616627 86 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC068870.2-201ENST00000620635 389 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 MIR8069-2-201ENST00000621412 86 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 CASC19-206ENST00000641028 1430 ntBASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RSPO3Q9BXY4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 DHX9P1-201ENST00000436565 3076 ntBASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 CASC19-281ENST00000642118 1554 ntBASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RSPO3Q9BXY4 AL136116.2-201ENST00000404020 785 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms