Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 OR8F1P-201ENST00000425243 930 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 USP9YP8-201ENST00000441913 500 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 COX6CP12-201ENST00000446748 202 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 RPS3AP17-201ENST00000472594 777 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC098818.1-201ENST00000478593 252 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 RPL29P23-201ENST00000486188 442 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL162632.2-201ENST00000553933 399 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 UBE2FP2-201ENST00000566646 462 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 RN7SL208P-201ENST00000577964 296 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL365503.1-201ENST00000605247 905 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC055876.5-201ENST00000605667 259 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC104458.1-201ENST00000608243 463 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL589743.6-201ENST00000611025 117 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 U1.41-201ENST00000617626 165 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 MIR6823-201ENST00000622118 61 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC087565.3-203ENST00000641018 837 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 LINC01739-205ENST00000641890 573 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AL139384.2-201ENST00000613809 3590 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 AC125238.2-201ENST00000430003 1440 ntBASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SSBP3Q9BWW4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AP005901.5-201ENST00000545779 1796 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 MRRFP1-201ENST00000435941 1675 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 FUNDC2P3-201ENST00000334716 533 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RNA5SP485-201ENST00000365053 119 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RNU6-348P-201ENST00000384386 107 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AC245036.1-201ENST00000391727 309 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL121977.1-201ENST00000401636 979 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 CIR1P3-201ENST00000405137 479 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RNU2-65P-201ENST00000410162 185 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RN7SKP129-201ENST00000410288 299 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 NRBF2P2-201ENST00000413087 861 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL359092.1-201ENST00000417156 265 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 RPL7AP51-201ENST00000422016 760 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 Z68868.1-201ENST00000429048 544 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 ATP5HP2-201ENST00000433885 485 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AC092170.1-201ENST00000440211 356 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 AL353898.1-201ENST00000444055 238 ntBASIC5.47□□□□□ -1.53
SSBP3Q9BWW4 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms