Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ARL4AP4-201ENST00000434170 518 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC002504.1-201ENST00000438281 691 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX3Q99909 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 RPS27AP2-201ENST00000457576 465 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC023141.9-201ENST00000458734 412 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 RPS17P15-201ENST00000475609 349 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 RPL32P33-201ENST00000487023 394 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 MTCO1P31-201ENST00000506355 492 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 RNU6-615P-201ENST00000516065 106 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC021678.3-201ENST00000517893 476 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC024940.3-201ENST00000538551 316 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 MIR4505-201ENST00000582238 73 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC133552.5-201ENST00000604266 540 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AL355802.4-201ENST00000607635 548 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC004477.3-201ENST00000614061 590 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX3Q99909 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.65□□□□□ -1.67
SSX3Q99909 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX3Q99909 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.65□□□□□ -1.67
SSX3Q99909 AL691477.1-201ENST00000624398 162 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC022919.1-201ENST00000624979 626 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 FRG1EP-201ENST00000634469 770 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AC006453.5-201ENST00000636451 619 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 AL049767.1-202ENST00000637826 242 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 AC007382.1-201ENST00000624376 2618 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SSX3Q99909 AC011447.7-201ENST00000624228 1590 ntBASIC4.65□□□□□ -1.67
SSX3Q99909 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.65□□□□□ -1.67
SSX3Q99909 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SSX3Q99909 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC007996.1-201ENST00000620414 2821 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SSX3Q99909 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSX3Q99909 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 AC019155.1-201ENST00000382242 574 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 RNU6-146P-201ENST00000384602 108 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL357752.1-201ENST00000412817 349 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL358176.3-201ENST00000420757 454 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL662874.1-201ENST00000426065 230 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX3Q99909 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSX3Q99909 EEF1B2P6-201ENST00000445713 673 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.64□□□□□ -1.67
SSX3Q99909 RPS23P6-201ENST00000466136 431 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 UBA52P3-201ENST00000491303 382 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL136038.1-201ENST00000497246 351 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSX3Q99909 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 RPL7L1P4-201ENST00000513004 707 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 RNU6-941P-201ENST00000516346 108 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC020978.7-201ENST00000575953 1187 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 SNORD95-201ENST00000579879 68 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 MIR7853-201ENST00000584820 132 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 MTCO3P22-201ENST00000603219 784 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.64□□□□□ -1.67
SSX3Q99909 OR4H6P-202ENST00000603819 340 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL049844.2-201ENST00000604280 628 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AC012557.1-201ENST00000607115 611 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 MIR6768-201ENST00000610734 72 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 RNA5SP440-201ENST00000612665 119 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.64□□□□□ -1.67
SSX3Q99909 AC093535.2-201ENST00000624769 2326 ntBASIC4.64□□□□□ -1.67
SSX3Q99909 AL451142.2-201ENST00000429076 2090 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms