Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 RN7SKP103-201ENST00000363848 320 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 U3.25-201ENST00000391209 220 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 MTCYBP38-201ENST00000417160 1123 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 EIF1P1-201ENST00000421436 341 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 GTF3AP5-201ENST00000442645 697 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC037198.2-201ENST00000478845 733 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL024509.2-201ENST00000493462 493 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 HPRT1P2-201ENST00000505250 544 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC116353.2-201ENST00000505332 712 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC109458.1-201ENST00000508858 316 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC010343.2-201ENST00000510162 224 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC084337.1-201ENST00000524809 686 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 MTCO3P15-201ENST00000526563 574 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 HNRNPCP1-201ENST00000556181 766 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 AL391497.1-201ENST00000608671 547 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 RFPL4AP6-201ENST00000616792 846 ntBASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.11□□□□□ -1.27
SYNGAP1Q96PV0 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AP001157.1-201ENST00000550837 2339 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RNA5SP273-201ENST00000362484 113 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 Y_RNA.41-201ENST00000362646 102 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 Y_RNA.192-201ENST00000363977 102 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 Y_RNA.248-201ENST00000364501 109 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RNA5SP284-201ENST00000384547 118 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SNORA40.2-201ENST00000390847 128 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RPL10P10-201ENST00000403509 664 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 MTND1P21-201ENST00000412991 285 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 USP9YP22-201ENST00000438971 294 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL137845.2-201ENST00000444292 988 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 MORF4-201ENST00000447135 971 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RHEBP2-201ENST00000450289 600 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 RPL5P32-201ENST00000454085 879 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SNX18P26-201ENST00000458433 740 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC090589.1-201ENST00000473109 362 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 NPM1P27-201ENST00000502784 830 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ARL4AP1-201ENST00000503220 705 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 BNIP3P41-201ENST00000503774 571 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 PSMA2P2-201ENST00000504319 686 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CBX3P3-201ENST00000508108 532 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC026782.2-201ENST00000510845 636 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 SNORD46.2-201ENST00000516021 102 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CDH12P4-201ENST00000517835 295 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CDH12P3-201ENST00000517935 295 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 CDH12P1-201ENST00000518435 295 ntBASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.1□□□□□ -1.27
SYNGAP1Q96PV0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms