Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC090616.1-201ENST00000583895 447 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 EIF1P6-201ENST00000600054 334 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC012368.3-201ENST00000604190 219 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC112220.3-201ENST00000605502 502 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC106028.5-201ENST00000610332 395 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MIR6823-201ENST00000622118 61 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC089999.3-201ENST00000622440 577 ntBASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.12□□□□□ -1.43
PTCHD1Q96NR3 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC013488.1-201ENST00000526618 1838 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC062022.1-201ENST00000451026 1684 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC022905.1-201ENST00000503430 3048 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 GTF2H2B-203ENST00000508065 1432 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 HMGB1P5-201ENST00000255320 642 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SNORA4.1-201ENST00000364263 144 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 RNA5SP512-201ENST00000364550 120 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 RNU6-185P-201ENST00000384421 107 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 RNU6-77P-201ENST00000410554 91 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 RPS26P38-201ENST00000414476 348 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 MRPS21P5-201ENST00000417885 231 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 RPL7AP51-201ENST00000422016 760 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 MGAT2P2-201ENST00000427194 797 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SEPT7P5-201ENST00000434048 306 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC003989.1-201ENST00000434569 565 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 MTCO3P11-201ENST00000455103 774 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 VPS26AP1-201ENST00000483197 979 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SNORA58-201ENST00000505219 137 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ARL2BPP4-201ENST00000506854 471 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC116917.1-201ENST00000520558 305 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 OR4A43P-201ENST00000532938 908 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC023968.1-201ENST00000560719 475 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC091135.1-201ENST00000585943 307 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC011472.4-201ENST00000615848 491 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 MRPL57P1-201ENST00000621486 265 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC025048.6-202ENST00000627667 438 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 AC025809.2-201ENST00000625085 1802 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms