Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC009963.3-201ENST00000458090 486 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AC005410.1-202ENST00000460347 485 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 GAPDHP62-201ENST00000515313 990 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 IGLV2-28-201ENST00000520681 304 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 MIR6809-201ENST00000612189 116 ntBASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CHAMP1Q96JM3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC078880.4-201ENST00000617627 1749 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC016745.2-201ENST00000608834 3443 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 RNU4-51P-201ENST00000364206 140 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 BMS1P3-201ENST00000372011 932 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 RNU6-932P-201ENST00000391108 106 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MCTS2P-201ENST00000394552 546 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 Y_RNA.625-201ENST00000411256 107 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MTCO2P7-201ENST00000446518 666 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MRPL35P4-201ENST00000453682 566 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 USP9YP25-201ENST00000457708 443 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC079203.1-201ENST00000487972 404 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MTND2P26-201ENST00000528255 1029 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC027544.3-201ENST00000535082 757 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC137627.1-201ENST00000545761 289 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC091078.2-201ENST00000557145 559 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC023813.2-201ENST00000564321 469 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC010547.6-201ENST00000571789 193 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MTND4LP24-201ENST00000572277 291 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC010245.2-201ENST00000606908 1167 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AC007671.2-201ENST00000637344 619 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHAMP1Q96JM3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 AL138880.1-201ENST00000405824 642 ntBASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 FCF1P5-201ENST00000406490 482 ntBASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 USP9YP26-201ENST00000421008 661 ntBASIC6.66□□□□□ -1.34
CHAMP1Q96JM3 OR5W1P-201ENST00000423705 938 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms